Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 OR2M1P-201ENST00000318104 951 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 MRPS6P2-201ENST00000381143 370 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 RPL5P20-201ENST00000403848 896 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 UBE2V2P4-201ENST00000447495 259 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AL139156.3-201ENST00000454802 394 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AC236972.4-201ENST00000458091 963 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 RPL23AP64-201ENST00000469465 435 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AC083906.1-201ENST00000509298 406 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AC093664.1-201ENST00000511779 289 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 IGHV3-57-201ENST00000520143 280 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AL162632.2-201ENST00000553933 399 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AC092718.4-201ENST00000566639 716 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AL953862.2-201ENST00000603089 820 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 BUB1P1-201ENST00000603541 607 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 CYCSP1-201ENST00000604815 315 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 GAPDHP41-201ENST00000613707 975 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AC114546.4-201ENST00000624413 369 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AC007603.3-201ENST00000636915 979 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AC087392.3-202ENST00000358446 1754 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 HSPD1P4-201ENST00000547203 1702 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 CASC19-228ENST00000641414 1684 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 CYP2G2P-201ENST00000594920 1485 ntBASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 RN7SKP184-201ENST00000362348 333 ntBASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 RN7SKP188-201ENST00000410789 317 ntBASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 Z82198.3-201ENST00000421145 199 ntBASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 Z68868.1-201ENST00000429048 544 ntBASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 AC092601.1-201ENST00000444526 383 ntBASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 AL020997.1-201ENST00000446554 349 ntBASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 RN7SL413P-201ENST00000482700 297 ntBASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 RPL5P14-201ENST00000494197 878 ntBASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 AC138517.1-201ENST00000515724 568 ntBASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 AC087360.1-201ENST00000518788 616 ntBASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf40Q8IXQ3 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms