Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MIR3611-201ENST00000584484 83 ntBASIC6.97□□□□□ -1.29
ATG4DQ86TL0 AC107993.1-201ENST00000591343 684 ntBASIC6.97□□□□□ -1.29
ATG4DQ86TL0 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 AC087468.1-201ENST00000604365 630 ntBASIC6.97□□□□□ -1.29
ATG4DQ86TL0 AL451085.1-201ENST00000604546 690 ntBASIC6.97□□□□□ -1.29
ATG4DQ86TL0 AC092954.2-201ENST00000609103 430 ntBASIC6.97□□□□□ -1.29
ATG4DQ86TL0 5S_rRNA.20-201ENST00000612104 118 ntBASIC6.97□□□□□ -1.29
ATG4DQ86TL0 MIR6726-201ENST00000613751 61 ntBASIC6.97□□□□□ -1.29
ATG4DQ86TL0 AL158063.1-201ENST00000615349 536 ntBASIC6.97□□□□□ -1.29
ATG4DQ86TL0 AL445649.1-201ENST00000615941 691 ntBASIC6.97□□□□□ -1.29
ATG4DQ86TL0 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC6.97□□□□□ -1.29
ATG4DQ86TL0 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 AC006328.2-201ENST00000623198 397 ntBASIC6.97□□□□□ -1.29
ATG4DQ86TL0 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 AC012005.2-201ENST00000624333 397 ntBASIC6.97□□□□□ -1.29
ATG4DQ86TL0 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.97□□□□□ -1.29
ATG4DQ86TL0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
ATG4DQ86TL0 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
ATG4DQ86TL0 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
ATG4DQ86TL0 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
ATG4DQ86TL0 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ATG4DQ86TL0 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ATG4DQ86TL0 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ATG4DQ86TL0 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ATG4DQ86TL0 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
ATG4DQ86TL0 AC126773.4-201ENST00000612545 3043 ntBASIC6.96□□□□□ -1.29
ATG4DQ86TL0 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
ATG4DQ86TL0 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
ATG4DQ86TL0 CASC19-238ENST00000641523 1558 ntBASIC6.96□□□□□ -1.29
ATG4DQ86TL0 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 FADS2P1-201ENST00000611807 1446 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 Y_RNA.303-201ENST00000364998 94 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 RNU6-207P-201ENST00000384137 107 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 RNU5A-2P-201ENST00000384337 116 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 MIR128-2-201ENST00000384893 84 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 MIR555-201ENST00000384987 96 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 MSRB1P1-201ENST00000396851 354 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AL353151.1-201ENST00000402406 604 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 RN7SKP39-201ENST00000410773 322 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AL390774.1-201ENST00000411924 246 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 USP9YP33-201ENST00000412220 421 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 OR10U1P-201ENST00000414690 905 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC017104.2-201ENST00000417000 321 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 CCDC58P2-201ENST00000417131 366 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 RPS3AP37-201ENST00000419176 745 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 ANKRD54P1-201ENST00000433115 471 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC099344.1-201ENST00000433548 492 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AL606752.1-201ENST00000435442 666 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 Z74696.2-201ENST00000436514 498 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 PTENP1-201ENST00000447117 1215 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 VN1R34P-201ENST00000447387 883 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AL031736.1-201ENST00000449688 618 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 OR52E3P-201ENST00000452083 936 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AL603882.1-201ENST00000463059 681 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 RPL6P9-201ENST00000466502 859 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 STRADBP1-201ENST00000478954 1281 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 ALG13-214ENST00000482742 620 ntTSL 2 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC074386.1-206ENST00000487102 761 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AF186996.3-201ENST00000509527 964 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC109811.2-201ENST00000509609 452 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 SUMO2P19-201ENST00000518920 295 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 RN7SL786P-201ENST00000579130 298 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms