Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM1Q2M3G4 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 BRAFP1-201ENST00000445336 2703 ntBASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 SNORA77.2-201ENST00000408571 112 ntBASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 RN7SKP108-201ENST00000411367 328 ntBASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 RPSAP65-201ENST00000429660 595 ntBASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 AC079807.1-201ENST00000429993 481 ntBASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 AC122713.1-201ENST00000518368 1015 ntBASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 TOMM20P1-201ENST00000534518 427 ntBASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 AL845552.1-201ENST00000556820 323 ntBASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 AC026898.1-201ENST00000586404 571 ntBASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 AC120057.5-201ENST00000623840 154 ntBASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM1Q2M3G4 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 RPL31P11-201ENST00000426558 1558 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 TMCC1P1-201ENST00000518897 1980 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 CASC19-246ENST00000641625 1606 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 ZNF812P-201ENST00000457674 1694 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 AC099782.1-201ENST00000425889 474 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 AC110602.1-201ENST00000437414 318 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 OR2L9P-201ENST00000444456 913 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 RN7SL834P-201ENST00000461450 286 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 RPL23AP68-201ENST00000480924 445 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 RPL3P13-201ENST00000550415 216 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 U1.41-201ENST00000617626 165 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 AC131009.3-201ENST00000621809 287 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 LINC02495-203ENST00000636704 242 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM1Q2M3G4 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms