Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.33□□□□□ -1.24
TPM4P67936 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
TPM4P67936 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.33□□□□□ -1.24
TPM4P67936 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
TPM4P67936 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.33□□□□□ -1.24
TPM4P67936 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.32□□□□□ -1.24
TPM4P67936 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TPM4P67936 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TPM4P67936 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.32□□□□□ -1.24
TPM4P67936 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TPM4P67936 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.32□□□□□ -1.24
TPM4P67936 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TPM4P67936 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
TPM4P67936 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TPM4P67936 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC7.32□□□□□ -1.24
TPM4P67936 AC109638.1-201ENST00000417406 326 ntBASIC7.32□□□□□ -1.24
TPM4P67936 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.32□□□□□ -1.24
TPM4P67936 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.32□□□□□ -1.24
TPM4P67936 AC133965.1-201ENST00000452984 354 ntBASIC7.32□□□□□ -1.24
TPM4P67936 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.32□□□□□ -1.24
TPM4P67936 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.32□□□□□ -1.24
TPM4P67936 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.32□□□□□ -1.24
TPM4P67936 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.32□□□□□ -1.24
TPM4P67936 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC7.32□□□□□ -1.24
TPM4P67936 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC7.32□□□□□ -1.24
TPM4P67936 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.32□□□□□ -1.24
TPM4P67936 AC140063.1-201ENST00000541343 259 ntBASIC7.32□□□□□ -1.24
TPM4P67936 AP002383.5-201ENST00000542623 1161 ntBASIC7.32□□□□□ -1.24
TPM4P67936 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
TPM4P67936 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC7.32□□□□□ -1.24
TPM4P67936 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TPM4P67936 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC7.32□□□□□ -1.24
TPM4P67936 AC092960.1-201ENST00000604762 351 ntBASIC7.32□□□□□ -1.24
TPM4P67936 AC114546.4-201ENST00000624413 369 ntBASIC7.32□□□□□ -1.24
TPM4P67936 AC008626.2-201ENST00000624425 248 ntBASIC7.32□□□□□ -1.24
TPM4P67936 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TPM4P67936 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
TPM4P67936 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TPM4P67936 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TPM4P67936 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TPM4P67936 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TPM4P67936 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.31□□□□□ -1.24
TPM4P67936 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
TPM4P67936 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
TPM4P67936 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TPM4P67936 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.31□□□□□ -1.24
TPM4P67936 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TPM4P67936 AL451046.1-201ENST00000406097 534 ntBASIC7.31□□□□□ -1.24
TPM4P67936 RN7SKP161-201ENST00000411110 305 ntBASIC7.31□□□□□ -1.24
TPM4P67936 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC7.31□□□□□ -1.24
TPM4P67936 CYCSP52-201ENST00000422857 310 ntBASIC7.31□□□□□ -1.24
TPM4P67936 VDAC2P3-201ENST00000430995 828 ntBASIC7.31□□□□□ -1.24
TPM4P67936 AL590128.1-201ENST00000433407 286 ntBASIC7.31□□□□□ -1.24
TPM4P67936 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.31□□□□□ -1.24
TPM4P67936 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.31□□□□□ -1.24
TPM4P67936 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.31□□□□□ -1.24
TPM4P67936 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.31□□□□□ -1.24
TPM4P67936 SNX18P26-201ENST00000458433 740 ntBASIC7.31□□□□□ -1.24
TPM4P67936 RN7SL149P-201ENST00000465197 281 ntBASIC7.31□□□□□ -1.24
TPM4P67936 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.31□□□□□ -1.24
TPM4P67936 SNRPCP6-201ENST00000528310 210 ntBASIC7.31□□□□□ -1.24
TPM4P67936 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC7.31□□□□□ -1.24
TPM4P67936 SSU72P6-201ENST00000532644 488 ntBASIC7.31□□□□□ -1.24
TPM4P67936 AL162632.2-201ENST00000553933 399 ntBASIC7.31□□□□□ -1.24
TPM4P67936 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.31□□□□□ -1.24
TPM4P67936 AC233702.7-202ENST00000582941 211 ntBASIC7.31□□□□□ -1.24
TPM4P67936 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.31□□□□□ -1.24
TPM4P67936 AL589765.5-201ENST00000596133 515 ntBASIC7.31□□□□□ -1.24
TPM4P67936 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
TPM4P67936 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
TPM4P67936 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TPM4P67936 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.31□□□□□ -1.24
TPM4P67936 LINC01616-201ENST00000561816 2280 ntBASIC7.31□□□□□ -1.24
TPM4P67936 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TPM4P67936 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TPM4P67936 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TPM4P67936 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TPM4P67936 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.31□□□□□ -1.24
TPM4P67936 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.31□□□□□ -1.24
TPM4P67936 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
TPM4P67936 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
TPM4P67936 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TPM4P67936 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TPM4P67936 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TPM4P67936 AC007998.4-201ENST00000612496 2533 ntBASIC7.3□□□□□ -1.24
TPM4P67936 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TPM4P67936 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TPM4P67936 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
TPM4P67936 SNORA30B-201ENST00000365319 129 ntBASIC7.3□□□□□ -1.24
TPM4P67936 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
TPM4P67936 TMA16P2-201ENST00000413187 601 ntBASIC7.3□□□□□ -1.24
TPM4P67936 HMGA1P8-201ENST00000414130 321 ntBASIC7.3□□□□□ -1.24
TPM4P67936 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms