Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.3
HOXD12P35452 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.96□□□□□ -1.3
HOXD12P35452 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.96□□□□□ -1.3
HOXD12P35452 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
HOXD12P35452 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HOXD12P35452 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HOXD12P35452 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
HOXD12P35452 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HOXD12P35452 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXD12P35452 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.95□□□□□ -1.3
HOXD12P35452 AC073365.1-203ENST00000641055 1992 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXD12P35452 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXD12P35452 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
HOXD12P35452 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXD12P35452 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 RN7SKP174-201ENST00000363803 330 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 SNORA64.3-201ENST00000365647 134 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 MIR323B-201ENST00000385269 82 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HOXD12P35452 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HOXD12P35452 VIM2P-201ENST00000402383 1294 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXD12P35452 CASKP1-201ENST00000412870 582 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 MTND4LP21-201ENST00000415303 295 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 MTND2P11-201ENST00000423638 648 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXD12P35452 UBE2V2P1-201ENST00000434717 398 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.95□□□□□ -1.3
HOXD12P35452 RPL5P10-201ENST00000445207 894 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 CEACAMP5-201ENST00000448037 961 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 RPL7AP71-201ENST00000451120 739 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXD12P35452 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 PGAM4P2-201ENST00000512491 721 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXD12P35452 SETP21-201ENST00000514799 892 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 RNU6-943P-201ENST00000516960 98 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.95□□□□□ -1.3
HOXD12P35452 EIF1AXP2-201ENST00000555940 413 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXD12P35452 MIR4732-201ENST00000581873 76 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 AC063962.1-201ENST00000608199 521 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXD12P35452 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXD12P35452 AC073857.1-201ENST00000625082 1054 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXD12P35452 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXD12P35452 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXD12P35452 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXD12P35452 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
HOXD12P35452 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 RNF19BPY-201ENST00000458209 1550 ntBASIC6.95□□□□□ -1.3
HOXD12P35452 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXD12P35452 AC012078.1-201ENST00000405035 1646 ntBASIC6.94□□□□□ -1.3
HOXD12P35452 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.94□□□□□ -1.3
HOXD12P35452 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXD12P35452 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXD12P35452 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXD12P35452 AC005618.1-201ENST00000606901 3148 ntBASIC6.94□□□□□ -1.3
HOXD12P35452 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXD12P35452 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.94□□□□□ -1.3
HOXD12P35452 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HOXD12P35452 FDPSP5-201ENST00000399474 1057 ntBASIC6.94□□□□□ -1.3
HOXD12P35452 RPL7P58-201ENST00000402913 758 ntBASIC6.94□□□□□ -1.3
HOXD12P35452 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.94□□□□□ -1.3
HOXD12P35452 AC008753.1-201ENST00000423096 284 ntBASIC6.94□□□□□ -1.3
HOXD12P35452 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.94□□□□□ -1.3
HOXD12P35452 AC092601.1-201ENST00000444526 383 ntBASIC6.94□□□□□ -1.3
HOXD12P35452 EEF1B2P3-201ENST00000447718 678 ntBASIC6.94□□□□□ -1.3
HOXD12P35452 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.94□□□□□ -1.3
HOXD12P35452 AL358876.1-201ENST00000453364 1075 ntBASIC6.94□□□□□ -1.3
HOXD12P35452 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.94□□□□□ -1.3
HOXD12P35452 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXD12P35452 RWDD4P1-201ENST00000488019 565 ntBASIC6.94□□□□□ -1.3
HOXD12P35452 RPL37P23-201ENST00000492641 294 ntBASIC6.94□□□□□ -1.3
HOXD12P35452 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.94□□□□□ -1.3
HOXD12P35452 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.94□□□□□ -1.3
HOXD12P35452 KCTD9P6-201ENST00000522306 950 ntBASIC6.94□□□□□ -1.3
HOXD12P35452 IGLVV-66-201ENST00000523818 341 ntBASIC6.94□□□□□ -1.3
HOXD12P35452 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.94□□□□□ -1.3
HOXD12P35452 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.94□□□□□ -1.3
HOXD12P35452 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.94□□□□□ -1.3
HOXD12P35452 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.94□□□□□ -1.3
HOXD12P35452 AC096708.2-201ENST00000577676 512 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms