Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ALDH7A1P4-201ENST00000412255 178 ntBASIC7□□□□□ -1.29
CTNNA1P35221 AL359633.1-201ENST00000421403 310 ntBASIC7□□□□□ -1.29
CTNNA1P35221 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC7□□□□□ -1.29
CTNNA1P35221 AC114402.2-201ENST00000432760 643 ntBASIC7□□□□□ -1.29
CTNNA1P35221 AL590128.1-201ENST00000433407 286 ntBASIC7□□□□□ -1.29
CTNNA1P35221 ATP5LP4-201ENST00000434169 307 ntBASIC7□□□□□ -1.29
CTNNA1P35221 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7□□□□□ -1.29
CTNNA1P35221 CR391992.1-201ENST00000438601 394 ntBASIC7□□□□□ -1.29
CTNNA1P35221 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC7□□□□□ -1.29
CTNNA1P35221 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7□□□□□ -1.29
CTNNA1P35221 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7□□□□□ -1.29
CTNNA1P35221 RPL7AP71-201ENST00000451120 739 ntBASIC7□□□□□ -1.29
CTNNA1P35221 RPL5P12-201ENST00000477071 851 ntBASIC7□□□□□ -1.29
CTNNA1P35221 RN7SL654P-201ENST00000479178 292 ntBASIC7□□□□□ -1.29
CTNNA1P35221 RN7SL776P-201ENST00000493390 268 ntBASIC7□□□□□ -1.29
CTNNA1P35221 AC097460.2-201ENST00000511857 741 ntBASIC7□□□□□ -1.29
CTNNA1P35221 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7□□□□□ -1.29
CTNNA1P35221 PDCL3P1-201ENST00000534575 734 ntBASIC7□□□□□ -1.29
CTNNA1P35221 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7□□□□□ -1.29
CTNNA1P35221 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7□□□□□ -1.29
CTNNA1P35221 PPIAP6-201ENST00000557078 499 ntBASIC7□□□□□ -1.29
CTNNA1P35221 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC7□□□□□ -1.29
CTNNA1P35221 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7□□□□□ -1.29
CTNNA1P35221 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7□□□□□ -1.29
CTNNA1P35221 AL157899.1-201ENST00000604110 936 ntBASIC7□□□□□ -1.29
CTNNA1P35221 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7□□□□□ -1.29
CTNNA1P35221 AC012254.5-201ENST00000623573 478 ntBASIC7□□□□□ -1.29
CTNNA1P35221 AC106782.7-201ENST00000624024 418 ntBASIC7□□□□□ -1.29
CTNNA1P35221 AC133555.5-201ENST00000624430 418 ntBASIC7□□□□□ -1.29
CTNNA1P35221 AC243725.1-201ENST00000637164 436 ntBASIC7□□□□□ -1.29
CTNNA1P35221 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7□□□□□ -1.29
CTNNA1P35221 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC7□□□□□ -1.29
CTNNA1P35221 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7□□□□□ -1.29
CTNNA1P35221 ZNF806-201ENST00000438300 1774 ntBASIC7□□□□□ -1.29
CTNNA1P35221 AC006511.3-201ENST00000624929 1783 ntBASIC7□□□□□ -1.29
CTNNA1P35221 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7□□□□□ -1.29
CTNNA1P35221 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
CTNNA1P35221 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7□□□□□ -1.29
CTNNA1P35221 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7□□□□□ -1.29
CTNNA1P35221 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
CTNNA1P35221 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
CTNNA1P35221 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CTNNA1P35221 ICE2P1-201ENST00000512800 1849 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CTNNA1P35221 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
CTNNA1P35221 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CTNNA1P35221 FAM32BP-201ENST00000344033 333 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 RNA5SP474-201ENST00000391234 90 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 AP003170.5-201ENST00000397185 335 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CTNNA1P35221 NACAP7-201ENST00000407371 609 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 RN7SKP137-201ENST00000411074 307 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 RN7SKP268-201ENST00000411107 316 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 AC017035.1-201ENST00000411999 1115 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.99□□□□□ -1.29
CTNNA1P35221 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.99□□□□□ -1.29
CTNNA1P35221 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.99□□□□□ -1.29
CTNNA1P35221 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.99□□□□□ -1.29
CTNNA1P35221 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.99□□□□□ -1.29
CTNNA1P35221 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.99□□□□□ -1.29
CTNNA1P35221 TUBBP11-201ENST00000472255 252 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 RPL5P15-201ENST00000475870 897 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.99□□□□□ -1.29
CTNNA1P35221 AC026774.2-201ENST00000513990 1098 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.99□□□□□ -1.29
CTNNA1P35221 MIR4800-201ENST00000537353 80 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.99□□□□□ -1.29
CTNNA1P35221 MIR4428-201ENST00000584884 73 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.99□□□□□ -1.29
CTNNA1P35221 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTNNA1P35221 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.99□□□□□ -1.29
CTNNA1P35221 AL035417.2-201ENST00000603887 796 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 AL121782.1-201ENST00000611242 413 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 AC004241.2-201ENST00000614562 444 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTNNA1P35221 AC241377.1-201ENST00000619797 406 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 AC018659.2-201ENST00000624690 715 ntBASIC6.99□□□□□ -1.29
CTNNA1P35221 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC6.99□□□□□ -1.29
CTNNA1P35221 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTNNA1P35221 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CTNNA1P35221 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.99□□□□□ -1.29
CTNNA1P35221 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.99□□□□□ -1.29
CTNNA1P35221 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
CTNNA1P35221 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.99□□□□□ -1.29
CTNNA1P35221 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.99□□□□□ -1.29
CTNNA1P35221 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTNNA1P35221 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTNNA1P35221 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTNNA1P35221 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CTNNA1P35221 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.98□□□□□ -1.29
CTNNA1P35221 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTNNA1P35221 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CTNNA1P35221 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTNNA1P35221 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CTNNA1P35221 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTNNA1P35221 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CTNNA1P35221 AC062022.1-201ENST00000451026 1684 ntBASIC6.98□□□□□ -1.29
CTNNA1P35221 CASC19-228ENST00000641414 1684 ntBASIC6.98□□□□□ -1.29
CTNNA1P35221 Y_RNA.209-201ENST00000364156 111 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms