Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
CDH3P22223 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.64□□□□□ -1.35
CDH3P22223 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.64□□□□□ -1.35
CDH3P22223 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.64□□□□□ -1.35
CDH3P22223 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.64□□□□□ -1.35
CDH3P22223 AC017037.4-201ENST00000624526 826 ntBASIC6.64□□□□□ -1.35
CDH3P22223 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.64□□□□□ -1.35
CDH3P22223 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CDH3P22223 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.64□□□□□ -1.35
CDH3P22223 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDH3P22223 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDH3P22223 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.64□□□□□ -1.35
CDH3P22223 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDH3P22223 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDH3P22223 AL132656.3-201ENST00000606384 1595 ntBASIC6.64□□□□□ -1.35
CDH3P22223 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.64□□□□□ -1.35
CDH3P22223 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDH3P22223 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDH3P22223 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDH3P22223 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.64□□□□□ -1.35
CDH3P22223 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDH3P22223 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.64□□□□□ -1.35
CDH3P22223 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.64□□□□□ -1.35
CDH3P22223 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.64□□□□□ -1.35
CDH3P22223 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.64□□□□□ -1.35
CDH3P22223 AC010329.1-201ENST00000593903 8328 ntBASIC6.63□□□□□ -1.35
CDH3P22223 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.63□□□□□ -1.35
CDH3P22223 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CDH3P22223 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.63□□□□□ -1.35
CDH3P22223 RN7SKP47-201ENST00000365347 328 ntBASIC6.63□□□□□ -1.35
CDH3P22223 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDH3P22223 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.63□□□□□ -1.35
CDH3P22223 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDH3P22223 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CDH3P22223 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDH3P22223 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CDH3P22223 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDH3P22223 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.63□□□□□ -1.35
CDH3P22223 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CDH3P22223 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.63□□□□□ -1.35
CDH3P22223 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.63□□□□□ -1.35
CDH3P22223 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.63□□□□□ -1.35
CDH3P22223 NMNAT1P3-201ENST00000457517 888 ntBASIC6.63□□□□□ -1.35
CDH3P22223 AC135721.2-201ENST00000464237 300 ntBASIC6.63□□□□□ -1.35
CDH3P22223 UOX-201ENST00000471089 899 ntBASIC6.63□□□□□ -1.35
CDH3P22223 AC128716.1-201ENST00000475129 166 ntBASIC6.63□□□□□ -1.35
CDH3P22223 AC131233.1-201ENST00000479200 955 ntBASIC6.63□□□□□ -1.35
CDH3P22223 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.63□□□□□ -1.35
CDH3P22223 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.63□□□□□ -1.35
CDH3P22223 RNA5SP318-201ENST00000516352 92 ntBASIC6.63□□□□□ -1.35
CDH3P22223 SNORA81.2-201ENST00000516868 170 ntBASIC6.63□□□□□ -1.35
CDH3P22223 RNA5SP278-201ENST00000517055 102 ntBASIC6.63□□□□□ -1.35
CDH3P22223 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.63□□□□□ -1.35
CDH3P22223 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.63□□□□□ -1.35
CDH3P22223 OR7E154P-201ENST00000525174 932 ntBASIC6.63□□□□□ -1.35
CDH3P22223 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.63□□□□□ -1.35
CDH3P22223 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.63□□□□□ -1.35
CDH3P22223 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.63□□□□□ -1.35
CDH3P22223 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.63□□□□□ -1.35
CDH3P22223 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.63□□□□□ -1.35
CDH3P22223 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.63□□□□□ -1.35
CDH3P22223 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CDH3P22223 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CDH3P22223 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.63□□□□□ -1.35
CDH3P22223 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.63□□□□□ -1.35
CDH3P22223 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.63□□□□□ -1.35
CDH3P22223 AL138693.1-201ENST00000622219 129 ntBASIC6.63□□□□□ -1.35
CDH3P22223 AC073862.4-201ENST00000622982 854 ntBASIC6.63□□□□□ -1.35
CDH3P22223 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.63□□□□□ -1.35
CDH3P22223 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDH3P22223 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDH3P22223 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDH3P22223 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDH3P22223 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CDH3P22223 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.63□□□□□ -1.35
CDH3P22223 AC009779.8-201ENST00000641684 4384 ntBASIC6.62□□□□□ -1.35
CDH3P22223 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.62□□□□□ -1.35
CDH3P22223 AC062029.1-202ENST00000606164 3651 ntBASIC6.62□□□□□ -1.35
CDH3P22223 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH3P22223 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.62□□□□□ -1.35
CDH3P22223 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.62□□□□□ -1.35
CDH3P22223 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.62□□□□□ -1.35
CDH3P22223 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CDH3P22223 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.62□□□□□ -1.35
CDH3P22223 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH3P22223 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH3P22223 RN7SKP130-201ENST00000364924 301 ntBASIC6.62□□□□□ -1.35
CDH3P22223 AC092634.1-201ENST00000366505 199 ntBASIC6.62□□□□□ -1.35
CDH3P22223 PPIAP26-201ENST00000377951 522 ntBASIC6.62□□□□□ -1.35
CDH3P22223 MIR199B-201ENST00000384849 110 ntBASIC6.62□□□□□ -1.35
CDH3P22223 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.62□□□□□ -1.35
CDH3P22223 RPL23AP18-201ENST00000416139 468 ntBASIC6.62□□□□□ -1.35
CDH3P22223 PTPN2P1-201ENST00000423212 1072 ntBASIC6.62□□□□□ -1.35
CDH3P22223 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.62□□□□□ -1.35
CDH3P22223 AC083855.1-201ENST00000440041 258 ntBASIC6.62□□□□□ -1.35
CDH3P22223 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.62□□□□□ -1.35
CDH3P22223 AC022080.2-201ENST00000452932 533 ntBASIC6.62□□□□□ -1.35
CDH3P22223 NPM1P9-201ENST00000453156 844 ntBASIC6.62□□□□□ -1.35
CDH3P22223 RPL31P11-202ENST00000454082 372 ntBASIC6.62□□□□□ -1.35
CDH3P22223 AC002075.1-201ENST00000457396 676 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms