Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RN7SKP81-201ENST00000365603 331 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.27□□□□□ -1.41
COL5A1P20908 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.27□□□□□ -1.41
COL5A1P20908 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.27□□□□□ -1.41
COL5A1P20908 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.27□□□□□ -1.41
COL5A1P20908 CEACAMP5-201ENST00000448037 961 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.27□□□□□ -1.41
COL5A1P20908 AC021074.2-201ENST00000468434 172 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.27□□□□□ -1.41
COL5A1P20908 RBBP4P1-201ENST00000502424 1276 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 AC095052.1-201ENST00000509955 863 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.27□□□□□ -1.41
COL5A1P20908 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.27□□□□□ -1.41
COL5A1P20908 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.27□□□□□ -1.41
COL5A1P20908 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.27□□□□□ -1.41
COL5A1P20908 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.27□□□□□ -1.41
COL5A1P20908 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.27□□□□□ -1.41
COL5A1P20908 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.27□□□□□ -1.41
COL5A1P20908 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.27□□□□□ -1.41
COL5A1P20908 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
COL5A1P20908 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.27□□□□□ -1.41
COL5A1P20908 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 CTAGE11P-201ENST00000451540 2353 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC6.27□□□□□ -1.41
COL5A1P20908 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.27□□□□□ -1.41
COL5A1P20908 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.27□□□□□ -1.41
COL5A1P20908 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
COL5A1P20908 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.27□□□□□ -1.41
COL5A1P20908 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC6.27□□□□□ -1.41
COL5A1P20908 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
COL5A1P20908 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
COL5A1P20908 MTCO1P28-201ENST00000574177 1528 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.27□□□□□ -1.41
COL5A1P20908 CDY17P-201ENST00000414121 1282 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.27□□□□□ -1.41
COL5A1P20908 MED28P4-201ENST00000433137 572 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.27□□□□□ -1.41
COL5A1P20908 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.27□□□□□ -1.41
COL5A1P20908 AC008638.1-201ENST00000506035 866 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 OR4D12P-201ENST00000509361 911 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.27□□□□□ -1.41
COL5A1P20908 NATP-201ENST00000523491 878 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.27□□□□□ -1.41
COL5A1P20908 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL5A1P20908 AC027369.2-201ENST00000528030 440 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.27□□□□□ -1.41
COL5A1P20908 AC016180.1-201ENST00000567945 403 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 AL021707.7-201ENST00000607991 416 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.27□□□□□ -1.41
COL5A1P20908 AC004948.1-201ENST00000609858 672 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL5A1P20908 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL5A1P20908 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL5A1P20908 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.27□□□□□ -1.41
COL5A1P20908 SAGE3P-201ENST00000619800 1635 ntBASIC6.27□□□□□ -1.41
COL5A1P20908 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL5A1P20908 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC6.27□□□□□ -1.41
COL5A1P20908 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL5A1P20908 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC6.26□□□□□ -1.41
COL5A1P20908 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
COL5A1P20908 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL5A1P20908 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL5A1P20908 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
COL5A1P20908 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL5A1P20908 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL5A1P20908 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL5A1P20908 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
COL5A1P20908 AC005839.1-201ENST00000624148 3213 ntBASIC6.26□□□□□ -1.41
COL5A1P20908 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL5A1P20908 RNA5SP346-201ENST00000363541 121 ntBASIC6.26□□□□□ -1.41
COL5A1P20908 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.26□□□□□ -1.41
COL5A1P20908 Z68868.1-201ENST00000429048 544 ntBASIC6.26□□□□□ -1.41
COL5A1P20908 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.26□□□□□ -1.41
COL5A1P20908 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.26□□□□□ -1.41
COL5A1P20908 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.26□□□□□ -1.41
COL5A1P20908 OR3D1P-201ENST00000438288 955 ntBASIC6.26□□□□□ -1.41
COL5A1P20908 AC002553.3-201ENST00000453002 341 ntBASIC6.26□□□□□ -1.41
COL5A1P20908 RN7SL643P-201ENST00000471845 291 ntBASIC6.26□□□□□ -1.41
COL5A1P20908 AC108043.1-201ENST00000512696 574 ntBASIC6.26□□□□□ -1.41
COL5A1P20908 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.26□□□□□ -1.41
COL5A1P20908 AC122713.1-201ENST00000518368 1015 ntBASIC6.26□□□□□ -1.41
COL5A1P20908 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.26□□□□□ -1.41
COL5A1P20908 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.26□□□□□ -1.41
COL5A1P20908 BNIP3P32-201ENST00000600015 554 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms