Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 OR51A1P-201ENST00000511110 946 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC5.03□□□□□ -1.6
CXCL1P09341 OR5M6P-201ENST00000530227 937 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL1P09341 AC018523.1-201ENST00000534211 512 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC5.03□□□□□ -1.6
CXCL1P09341 NXPE2P1-201ENST00000543705 726 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC5.03□□□□□ -1.6
CXCL1P09341 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.03□□□□□ -1.6
CXCL1P09341 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.03□□□□□ -1.6
CXCL1P09341 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC5.03□□□□□ -1.6
CXCL1P09341 UBE2CP4-201ENST00000561405 535 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 GLYATL1P2-202ENST00000588046 902 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC5.03□□□□□ -1.6
CXCL1P09341 AC002069.2-201ENST00000603580 883 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
CXCL1P09341 AL139123.1-201ENST00000612008 430 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 uc_338.37-201ENST00000620113 186 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 AC069234.4-201ENST00000621276 412 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 C18orf12-201ENST00000623329 537 ntBASIC5.03□□□□□ -1.6
CXCL1P09341 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC5.03□□□□□ -1.6
CXCL1P09341 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC5.03□□□□□ -1.6
CXCL1P09341 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL1P09341 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
CXCL1P09341 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.03□□□□□ -1.6
CXCL1P09341 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL1P09341 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CXCL1P09341 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CXCL1P09341 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CXCL1P09341 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 NEK2P2-201ENST00000438441 1338 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 FOLH1B-202ENST00000529567 2145 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CXCL1P09341 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.02□□□□□ -1.61
CXCL1P09341 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 RNA5SP350-201ENST00000363298 111 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 RNA5SP396-201ENST00000364834 120 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 MIR181C-201ENST00000384881 110 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 RNA5SP35-201ENST00000391257 129 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC5.02□□□□□ -1.61
CXCL1P09341 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 AC007562.1-201ENST00000421819 517 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC5.02□□□□□ -1.61
CXCL1P09341 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CXCL1P09341 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 AC023274.2-201ENST00000445264 521 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 AL022237.1-201ENST00000446663 358 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 CYCSP44-201ENST00000448560 313 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 WBP1LP1-201ENST00000460451 896 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 AC083806.1-201ENST00000468934 316 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 RN7SL58P-201ENST00000473445 294 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 GLYATL1P4-201ENST00000529326 906 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC5.02□□□□□ -1.61
CXCL1P09341 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.02□□□□□ -1.61
CXCL1P09341 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC5.02□□□□□ -1.61
CXCL1P09341 AC025252.2-201ENST00000537470 502 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 AC007537.1-201ENST00000539347 327 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC5.02□□□□□ -1.61
CXCL1P09341 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC5.02□□□□□ -1.61
CXCL1P09341 NPM1P42-201ENST00000560329 862 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 AC026458.1-201ENST00000564330 438 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 AC019322.1-201ENST00000571869 389 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC5.02□□□□□ -1.61
CXCL1P09341 RN7SL270P-201ENST00000579643 281 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 CTSLP2-201ENST00000580501 394 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.02□□□□□ -1.61
CXCL1P09341 RN7SL778P-201ENST00000607160 297 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 AL136097.3-201ENST00000611097 505 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 AC024255.1-201ENST00000614376 102 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 AP005212.3-201ENST00000619964 528 ntBASIC5.02□□□□□ -1.61
CXCL1P09341 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL1P09341 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CXCL1P09341 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms