Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC020658.2-201ENST00000559030 4020 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC005225.5-201ENST00000623547 2225 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 RNU1-55P-201ENST00000365510 158 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AL139415.1-201ENST00000424862 352 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 PHBP4-201ENST00000437447 837 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AL354714.5-201ENST00000450131 590 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC079193.1-201ENST00000460497 588 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC092824.1-201ENST00000483524 576 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 RN7SL518P-201ENST00000491887 280 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 RPL17P2-201ENST00000491913 451 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 MTCYBP44-201ENST00000514835 823 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 RN7SKP248-201ENST00000516278 305 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 RNA5SP278-201ENST00000517055 102 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AP001646.2-201ENST00000528645 1156 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 NDUFA3P2-201ENST00000531434 232 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 OR52K3P-201ENST00000531655 943 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 VDAC2P2-201ENST00000544463 901 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 NQO1-205ENST00000561500 891 ntTSL 3 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC026458.1-201ENST00000564330 438 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC011921.2-201ENST00000589465 152 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AL157899.1-201ENST00000604110 936 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC097467.4-201ENST00000605504 141 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC012510.1-201ENST00000607946 759 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC016590.3-201ENST00000611171 753 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AL161931.1-201ENST00000612768 246 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AP001153.1-201ENST00000641024 338 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC006213.6-201ENST00000623722 4179 ntBASIC5.93□□□□□ -1.46
COPS3Q9UNS2 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.93□□□□□ -1.46
COPS3Q9UNS2 AC105749.1-201ENST00000631338 2008 ntBASIC5.92□□□□□ -1.46
COPS3Q9UNS2 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
COPS3Q9UNS2 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPS3Q9UNS2 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COPS3Q9UNS2 MTND5P12-201ENST00000502851 1449 ntBASIC5.92□□□□□ -1.46
COPS3Q9UNS2 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPS3Q9UNS2 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.92□□□□□ -1.46
COPS3Q9UNS2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPS3Q9UNS2 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPS3Q9UNS2 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPS3Q9UNS2 HSP90AA2P-201ENST00000530115 2196 ntBASIC5.92□□□□□ -1.46
COPS3Q9UNS2 AC068769.1-201ENST00000474767 2426 ntBASIC5.92□□□□□ -1.46
COPS3Q9UNS2 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPS3Q9UNS2 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COPS3Q9UNS2 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPS3Q9UNS2 RNA5SP427-201ENST00000365323 119 ntBASIC5.92□□□□□ -1.46
COPS3Q9UNS2 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COPS3Q9UNS2 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.92□□□□□ -1.46
COPS3Q9UNS2 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms