Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNBIP1Q9NSA3 AL442128.2-201ENST00000620246 1824 ntBASIC5.38□□□□□ -1.55
CTNNBIP1Q9NSA3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.38□□□□□ -1.55
CTNNBIP1Q9NSA3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNBIP1Q9NSA3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNBIP1Q9NSA3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNBIP1Q9NSA3 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNBIP1Q9NSA3 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.38□□□□□ -1.55
CTNNBIP1Q9NSA3 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNBIP1Q9NSA3 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNBIP1Q9NSA3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AC105749.1-201ENST00000631338 2008 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 RN7SKP237-201ENST00000364663 301 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 RNU12-2P-201ENST00000364789 156 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 RNA5SP280-201ENST00000411230 115 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AC109638.1-201ENST00000417406 326 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AC097721.1-201ENST00000427150 1253 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 RPL22P11-201ENST00000434894 385 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 ST13P2-201ENST00000438916 1109 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 RPSAP24-201ENST00000461543 873 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 RN7SL518P-201ENST00000491887 280 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 RNA5SP318-201ENST00000516352 92 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AC084337.1-201ENST00000524809 686 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AC092032.1-201ENST00000603090 165 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 pRNA.9-201ENST00000618609 89 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AC010320.5-201ENST00000619124 676 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AC017037.4-201ENST00000624526 826 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AC018659.2-201ENST00000624690 715 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AL121936.2-201ENST00000641935 662 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AL137058.3-201ENST00000624531 3099 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AP004289.1-201ENST00000436307 2205 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AC012078.1-201ENST00000405035 1646 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 AL355377.1-201ENST00000621125 1653 ntBASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNBIP1Q9NSA3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 NPM1P14-201ENST00000343743 866 ntBASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 RNA5SP114-201ENST00000363780 113 ntBASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 SNORA30B-201ENST00000365319 129 ntBASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 U3.14-201ENST00000365363 227 ntBASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 AL451142.1-201ENST00000375867 775 ntBASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 RNA5SP474-201ENST00000391234 90 ntBASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 RPS17P17-201ENST00000419392 409 ntBASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 RPL29P7-201ENST00000440227 457 ntBASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.36□□□□□ -1.55
CTNNBIP1Q9NSA3 AL096803.1-201ENST00000456921 1021 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms