Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 BX323046.1-201ENST00000610145 535 ntBASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 AC245060.6-201ENST00000624350 8420 ntBASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 TMSB4XP2-201ENST00000335179 210 ntBASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 SNORA51.1-201ENST00000363243 140 ntBASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 IGLV3-4-201ENST00000432300 244 ntBASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 RPL34P33-201ENST00000486062 334 ntBASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 RN7SL214P-201ENST00000487317 265 ntBASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 AC007956.1-201ENST00000555623 542 ntBASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 AC090616.1-201ENST00000583895 447 ntBASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 AL359704.2-201ENST00000604335 521 ntBASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 AC005393.1-201ENST00000617916 584 ntBASIC9.65□□□□□ -0.87
CDC42BPAQ5VT25 AC119674.1-204ENST00000641348 1343 ntBASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 ZNF619P1-201ENST00000446539 752 ntBASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 RN7SL273P-201ENST00000481561 299 ntBASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 MTATP6P1-201ENST00000514057 681 ntBASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 AL008723.3-201ENST00000608926 449 ntBASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 AC108673.3-201ENST00000609183 335 ntBASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CDC42BPAQ5VT25 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 USP48-203ENST00000374732 3037 ntTSL 2 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 AC027229.1-201ENST00000583887 253 ntBASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 AC073488.3-201ENST00000631611 778 ntBASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 AC010624.4-201ENST00000597606 1351 ntBASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CDC42BPAQ5VT25 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 RN7SKP81-201ENST00000365603 331 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 MORF4L1P5-201ENST00000433352 961 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 RNA5SP440-201ENST00000612665 119 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 AC022106.1-201ENST00000612834 766 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms