Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
ATP7AQ04656 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ATP7AQ04656 AC015871.3-201ENST00000618835 2261 ntBASIC9.54□□□□□ -0.88
ATP7AQ04656 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
ATP7AQ04656 RN7SKP286-201ENST00000410894 299 ntBASIC9.54□□□□□ -0.88
ATP7AQ04656 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC9.54□□□□□ -0.88
ATP7AQ04656 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ATP7AQ04656 HIGD1AP16-201ENST00000450986 258 ntBASIC9.54□□□□□ -0.88
ATP7AQ04656 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC9.54□□□□□ -0.88
ATP7AQ04656 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC9.54□□□□□ -0.88
ATP7AQ04656 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC9.54□□□□□ -0.88
ATP7AQ04656 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC9.54□□□□□ -0.88
ATP7AQ04656 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ATP7AQ04656 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC9.54□□□□□ -0.88
ATP7AQ04656 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC9.54□□□□□ -0.88
ATP7AQ04656 AC010998.3-201ENST00000613871 631 ntBASIC9.54□□□□□ -0.88
ATP7AQ04656 RFPL4AP6-201ENST00000616792 846 ntBASIC9.54□□□□□ -0.88
ATP7AQ04656 5S_rRNA.28-201ENST00000638107 119 ntBASIC9.54□□□□□ -0.88
ATP7AQ04656 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC9.54□□□□□ -0.88
ATP7AQ04656 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC9.54□□□□□ -0.88
ATP7AQ04656 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC9.54□□□□□ -0.88
ATP7AQ04656 DYNC1I2P1-201ENST00000435916 1838 ntBASIC9.54□□□□□ -0.88
ATP7AQ04656 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ATP7AQ04656 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
ATP7AQ04656 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC9.54□□□□□ -0.88
ATP7AQ04656 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
ATP7AQ04656 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC9.54□□□□□ -0.88
ATP7AQ04656 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC9.54□□□□□ -0.88
ATP7AQ04656 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC9.53□□□□□ -0.88
ATP7AQ04656 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ATP7AQ04656 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC9.53□□□□□ -0.88
ATP7AQ04656 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC9.53□□□□□ -0.88
ATP7AQ04656 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
ATP7AQ04656 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC9.53□□□□□ -0.88
ATP7AQ04656 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC9.53□□□□□ -0.88
ATP7AQ04656 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
ATP7AQ04656 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
ATP7AQ04656 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
ATP7AQ04656 MIR937-201ENST00000401271 86 ntBASIC9.53□□□□□ -0.88
ATP7AQ04656 AL096711.1-201ENST00000404780 554 ntBASIC9.53□□□□□ -0.88
ATP7AQ04656 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC9.53□□□□□ -0.88
ATP7AQ04656 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ATP7AQ04656 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC9.53□□□□□ -0.88
ATP7AQ04656 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
ATP7AQ04656 AP000281.1-201ENST00000444036 316 ntBASIC9.53□□□□□ -0.88
ATP7AQ04656 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC9.53□□□□□ -0.88
ATP7AQ04656 RNA5SP362-201ENST00000516048 118 ntBASIC9.53□□□□□ -0.88
ATP7AQ04656 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC9.53□□□□□ -0.88
ATP7AQ04656 PLEKHA3P1-201ENST00000598554 894 ntBASIC9.53□□□□□ -0.88
ATP7AQ04656 AC025171.4-201ENST00000607250 1047 ntBASIC9.53□□□□□ -0.88
ATP7AQ04656 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC9.53□□□□□ -0.88
ATP7AQ04656 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC9.53□□□□□ -0.88
ATP7AQ04656 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC9.53□□□□□ -0.88
ATP7AQ04656 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC9.53□□□□□ -0.88
ATP7AQ04656 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ATP7AQ04656 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ATP7AQ04656 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC9.53□□□□□ -0.88
ATP7AQ04656 AC023245.2-201ENST00000530760 2978 ntBASIC9.53□□□□□ -0.88
ATP7AQ04656 MELK-207ENST00000536860 2342 ntTSL 2 BASIC9.53□□□□□ -0.88
ATP7AQ04656 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
ATP7AQ04656 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ATP7AQ04656 NEK2P2-201ENST00000438441 1338 ntBASIC9.53□□□□□ -0.88
ATP7AQ04656 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC9.53□□□□□ -0.88
ATP7AQ04656 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
ATP7AQ04656 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
ATP7AQ04656 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
ATP7AQ04656 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC9.52□□□□□ -0.88
ATP7AQ04656 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC9.52□□□□□ -0.88
ATP7AQ04656 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
ATP7AQ04656 AC096537.2-201ENST00000413707 714 ntBASIC9.52□□□□□ -0.88
ATP7AQ04656 GAPDHP48-201ENST00000436626 961 ntBASIC9.52□□□□□ -0.88
ATP7AQ04656 HMGN1P36-201ENST00000446623 298 ntBASIC9.52□□□□□ -0.88
ATP7AQ04656 AC023141.9-201ENST00000458734 412 ntBASIC9.52□□□□□ -0.88
ATP7AQ04656 RN7SL326P-201ENST00000477493 296 ntBASIC9.52□□□□□ -0.88
ATP7AQ04656 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC9.52□□□□□ -0.88
ATP7AQ04656 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
ATP7AQ04656 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
ATP7AQ04656 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC9.52□□□□□ -0.88
ATP7AQ04656 AP001858.2-201ENST00000536213 601 ntBASIC9.52□□□□□ -0.88
ATP7AQ04656 RARSP1-201ENST00000542842 1418 ntBASIC9.52□□□□□ -0.88
ATP7AQ04656 RPA2P1-201ENST00000556557 721 ntBASIC9.52□□□□□ -0.88
ATP7AQ04656 AC092121.1-201ENST00000569452 202 ntBASIC9.52□□□□□ -0.88
ATP7AQ04656 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
ATP7AQ04656 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC9.52□□□□□ -0.88
ATP7AQ04656 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC9.52□□□□□ -0.88
ATP7AQ04656 AC108673.3-201ENST00000609183 335 ntBASIC9.52□□□□□ -0.88
ATP7AQ04656 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC9.52□□□□□ -0.88
ATP7AQ04656 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC9.52□□□□□ -0.88
ATP7AQ04656 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
ATP7AQ04656 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
ATP7AQ04656 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
ATP7AQ04656 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
ATP7AQ04656 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
ATP7AQ04656 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
ATP7AQ04656 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC9.52□□□□□ -0.89
ATP7AQ04656 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
ATP7AQ04656 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
ATP7AQ04656 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC9.52□□□□□ -0.89
ATP7AQ04656 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
ATP7AQ04656 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms