Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.52□□□□□ -1.53
CX3CL1P78423 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CX3CL1P78423 AP000641.1-201ENST00000531988 1639 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CL1P78423 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CL1P78423 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CX3CL1P78423 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CL1P78423 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CL1P78423 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CL1P78423 AC022417.1-201ENST00000624768 1303 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CX3CL1P78423 AL359263.1-201ENST00000441188 2796 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CL1P78423 AC062029.1-202ENST00000606164 3651 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.51□□□□□ -1.53
CX3CL1P78423 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.51□□□□□ -1.53
CX3CL1P78423 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CX3CL1P78423 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.51□□□□□ -1.53
CX3CL1P78423 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.51□□□□□ -1.53
CX3CL1P78423 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.51□□□□□ -1.53
CX3CL1P78423 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CL1P78423 NPM1P14-201ENST00000343743 866 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 RNU6-819P-201ENST00000364116 107 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 RNA5SP512-201ENST00000364550 120 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 RN7SKP47-201ENST00000365347 328 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AC024937.2-201ENST00000411669 1242 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.51□□□□□ -1.53
CX3CL1P78423 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.51□□□□□ -1.53
CX3CL1P78423 RPL12P43-201ENST00000420608 499 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AL138479.1-201ENST00000426913 484 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 OR52S1P-201ENST00000427016 937 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC5.51□□□□□ -1.53
CX3CL1P78423 AC007365.2-201ENST00000428806 458 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AC018804.1-201ENST00000430381 618 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.51□□□□□ -1.53
CX3CL1P78423 MYL6P3-201ENST00000436904 432 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.51□□□□□ -1.53
CX3CL1P78423 MED28P7-201ENST00000456611 530 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AC079193.1-201ENST00000460497 588 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 RN7SL149P-201ENST00000465197 281 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 RPL21P42-201ENST00000488408 464 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.51□□□□□ -1.53
CX3CL1P78423 RNU6-1334P-201ENST00000516032 105 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 RN7SKP11-201ENST00000517018 287 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.51□□□□□ -1.53
CX3CL1P78423 SSU72P6-201ENST00000532644 488 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AC007537.1-201ENST00000539347 327 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 NXPE2P1-201ENST00000543705 726 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC5.51□□□□□ -1.53
CX3CL1P78423 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.51□□□□□ -1.53
CX3CL1P78423 AC011447.2-201ENST00000592921 283 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.51□□□□□ -1.53
CX3CL1P78423 AC005520.3-201ENST00000602874 370 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 KATNBL1P1-201ENST00000605192 748 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.51□□□□□ -1.53
CX3CL1P78423 AL512413.1-201ENST00000606489 382 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 OR7M1P-201ENST00000608946 533 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AL162574.2-201ENST00000614618 657 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CL1P78423 AC003001.2-201ENST00000616294 831 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 AC103564.3-201ENST00000621194 220 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CX3CL1P78423 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CL1P78423 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC5.51□□□□□ -1.53
CX3CL1P78423 CLCA3P-203ENST00000490028 2781 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CL1P78423 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CL1P78423 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CL1P78423 ASNSP6-201ENST00000592770 1618 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CL1P78423 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.51□□□□□ -1.53
CX3CL1P78423 AL137058.3-201ENST00000624531 3099 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CX3CL1P78423 AC004014.2-201ENST00000623718 5122 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 LRRC37A12P-201ENST00000454917 1801 ntBASIC5.51□□□□□ -1.53
CX3CL1P78423 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
CX3CL1P78423 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC5.5□□□□□ -1.53
CX3CL1P78423 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CX3CL1P78423 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CX3CL1P78423 RPL9P21-201ENST00000392269 505 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CL1P78423 PDCL3P5-201ENST00000398028 722 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 RNU4-64P-201ENST00000410795 131 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 RN7SKP268-201ENST00000411107 316 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.5□□□□□ -1.53
CX3CL1P78423 MTND2P12-201ENST00000417560 1252 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 AL161742.1-201ENST00000418154 584 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CX3CL1P78423 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.5□□□□□ -1.53
CX3CL1P78423 AC009518.3-201ENST00000438972 253 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 AC114878.1-201ENST00000441166 358 ntBASIC5.5□□□□□ -1.53
CX3CL1P78423 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms