Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SKP1P63208 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SKP1P63208 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SKP1P63208 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SKP1P63208 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SKP1P63208 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.39□□□□□ -1.39
SKP1P63208 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SKP1P63208 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SKP1P63208 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SKP1P63208 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SKP1P63208 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.39□□□□□ -1.39
SKP1P63208 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
SKP1P63208 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.38□□□□□ -1.39
SKP1P63208 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.38□□□□□ -1.39
SKP1P63208 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SKP1P63208 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.38□□□□□ -1.39
SKP1P63208 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SKP1P63208 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SKP1P63208 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SKP1P63208 SNORA38B-201ENST00000363524 131 ntBASIC6.38□□□□□ -1.39
SKP1P63208 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 MIR640-201ENST00000385086 96 ntBASIC6.38□□□□□ -1.39
SKP1P63208 AC026310.1-201ENST00000396004 378 ntBASIC6.38□□□□□ -1.39
SKP1P63208 RPL6P21-201ENST00000418672 846 ntBASIC6.38□□□□□ -1.39
SKP1P63208 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.38□□□□□ -1.39
SKP1P63208 AL589794.1-201ENST00000424971 390 ntBASIC6.38□□□□□ -1.39
SKP1P63208 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.38□□□□□ -1.39
SKP1P63208 UBBP5-201ENST00000446970 266 ntBASIC6.38□□□□□ -1.39
SKP1P63208 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.38□□□□□ -1.39
SKP1P63208 AL445991.1-201ENST00000450381 475 ntBASIC6.38□□□□□ -1.39
SKP1P63208 RPL31P11-202ENST00000454082 372 ntBASIC6.38□□□□□ -1.39
SKP1P63208 RN7SL502P-201ENST00000481857 290 ntBASIC6.38□□□□□ -1.39
SKP1P63208 RPL5P11-201ENST00000498068 893 ntBASIC6.38□□□□□ -1.39
SKP1P63208 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.38□□□□□ -1.39
SKP1P63208 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.38□□□□□ -1.39
SKP1P63208 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.38□□□□□ -1.39
SKP1P63208 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.38□□□□□ -1.39
SKP1P63208 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.38□□□□□ -1.39
SKP1P63208 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.38□□□□□ -1.39
SKP1P63208 AC106785.4-201ENST00000569492 412 ntBASIC6.38□□□□□ -1.39
SKP1P63208 AC091133.5-201ENST00000603088 301 ntBASIC6.38□□□□□ -1.39
SKP1P63208 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.38□□□□□ -1.39
SKP1P63208 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.38□□□□□ -1.39
SKP1P63208 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.38□□□□□ -1.39
SKP1P63208 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.38□□□□□ -1.39
SKP1P63208 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.38□□□□□ -1.39
SKP1P63208 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.38□□□□□ -1.39
SKP1P63208 AL596275.2-208ENST00000641192 594 ntBASIC6.38□□□□□ -1.39
SKP1P63208 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.38□□□□□ -1.39
SKP1P63208 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SKP1P63208 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.38□□□□□ -1.39
SKP1P63208 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.38□□□□□ -1.39
SKP1P63208 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.38□□□□□ -1.39
SKP1P63208 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
SKP1P63208 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SKP1P63208 AC093278.2-201ENST00000564956 2485 ntBASIC6.37□□□□□ -1.39
SKP1P63208 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SKP1P63208 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SKP1P63208 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SKP1P63208 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SKP1P63208 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SKP1P63208 ASNSP6-201ENST00000592770 1618 ntBASIC6.37□□□□□ -1.39
SKP1P63208 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.37□□□□□ -1.39
SKP1P63208 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SKP1P63208 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SKP1P63208 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SKP1P63208 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SKP1P63208 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SKP1P63208 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SKP1P63208 RN7SKP118-201ENST00000364331 330 ntBASIC6.37□□□□□ -1.39
SKP1P63208 SNORA70.3-201ENST00000365075 132 ntBASIC6.37□□□□□ -1.39
SKP1P63208 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SKP1P63208 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SKP1P63208 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SKP1P63208 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SKP1P63208 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.37□□□□□ -1.39
SKP1P63208 AL929472.1-201ENST00000417484 429 ntBASIC6.37□□□□□ -1.39
SKP1P63208 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.37□□□□□ -1.39
SKP1P63208 E2F6P1-201ENST00000428850 745 ntBASIC6.37□□□□□ -1.39
SKP1P63208 AK3P5-201ENST00000432033 519 ntBASIC6.37□□□□□ -1.39
SKP1P63208 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.37□□□□□ -1.39
SKP1P63208 NPM1P23-201ENST00000440193 849 ntBASIC6.37□□□□□ -1.39
SKP1P63208 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.37□□□□□ -1.39
SKP1P63208 AC011742.2-201ENST00000443818 352 ntBASIC6.37□□□□□ -1.39
SKP1P63208 WDR82P2-201ENST00000444540 928 ntBASIC6.37□□□□□ -1.39
SKP1P63208 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms