Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMK2P53671 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.74□□□□□ -1.33
LIMK2P53671 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMK2P53671 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMK2P53671 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMK2P53671 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
LIMK2P53671 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMK2P53671 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMK2P53671 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIMK2P53671 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIMK2P53671 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
LIMK2P53671 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 MARK2P4-201ENST00000503381 2380 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
LIMK2P53671 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIMK2P53671 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.73□□□□□ -1.33
LIMK2P53671 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
LIMK2P53671 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIMK2P53671 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LIMK2P53671 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIMK2P53671 SNORD94-201ENST00000386037 137 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 AL033519.1-201ENST00000407266 307 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 RN7SKP205-201ENST00000410999 307 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 AL663061.1-201ENST00000416625 580 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 AC239367.3-201ENST00000428996 814 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
LIMK2P53671 AC096632.2-201ENST00000438139 1239 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 AL034369.1-201ENST00000453808 477 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.73□□□□□ -1.33
LIMK2P53671 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 IGHV3-57-201ENST00000520143 280 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.73□□□□□ -1.33
LIMK2P53671 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.73□□□□□ -1.33
LIMK2P53671 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.73□□□□□ -1.33
LIMK2P53671 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.73□□□□□ -1.33
LIMK2P53671 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.73□□□□□ -1.33
LIMK2P53671 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 AC005393.1-201ENST00000617916 584 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 AC017037.4-201ENST00000624526 826 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 CLUHP10-201ENST00000631979 980 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 AC007603.3-201ENST00000636915 979 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIMK2P53671 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
LIMK2P53671 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.73□□□□□ -1.33
LIMK2P53671 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
LIMK2P53671 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIMK2P53671 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIMK2P53671 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
LIMK2P53671 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LIMK2P53671 AC110716.2-201ENST00000563865 3945 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.73□□□□□ -1.33
LIMK2P53671 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
LIMK2P53671 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LIMK2P53671 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 Z93929.1-201ENST00000418200 1475 ntBASIC6.73□□□□□ -1.33
LIMK2P53671 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LIMK2P53671 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIMK2P53671 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.72□□□□□ -1.33
LIMK2P53671 MTCO1P25-201ENST00000414449 1799 ntBASIC6.72□□□□□ -1.33
LIMK2P53671 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIMK2P53671 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LIMK2P53671 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
LIMK2P53671 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.72□□□□□ -1.33
LIMK2P53671 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LIMK2P53671 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIMK2P53671 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIMK2P53671 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIMK2P53671 RNA5SP382-201ENST00000363355 112 ntBASIC6.72□□□□□ -1.33
LIMK2P53671 RN7SKP130-201ENST00000364924 301 ntBASIC6.72□□□□□ -1.33
LIMK2P53671 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LIMK2P53671 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.72□□□□□ -1.33
LIMK2P53671 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.72□□□□□ -1.33
LIMK2P53671 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.72□□□□□ -1.33
LIMK2P53671 SPATA20P1-201ENST00000423089 438 ntBASIC6.72□□□□□ -1.33
LIMK2P53671 AHCYP8-201ENST00000425108 209 ntBASIC6.72□□□□□ -1.33
LIMK2P53671 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.72□□□□□ -1.33
LIMK2P53671 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.72□□□□□ -1.33
LIMK2P53671 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.72□□□□□ -1.33
LIMK2P53671 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.72□□□□□ -1.33
LIMK2P53671 AL445991.1-201ENST00000450381 475 ntBASIC6.72□□□□□ -1.33
LIMK2P53671 OR52E7P-201ENST00000452394 933 ntBASIC6.72□□□□□ -1.33
LIMK2P53671 AC133965.1-201ENST00000452984 354 ntBASIC6.72□□□□□ -1.33
LIMK2P53671 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.72□□□□□ -1.33
LIMK2P53671 RN7SL390P-201ENST00000470634 284 ntBASIC6.72□□□□□ -1.33
LIMK2P53671 AC044810.1-201ENST00000480271 711 ntBASIC6.72□□□□□ -1.33
LIMK2P53671 H3F3AP3-201ENST00000497682 407 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms