Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.17□□□□□ -1.26
RB1P06400 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.17□□□□□ -1.26
RB1P06400 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.17□□□□□ -1.26
RB1P06400 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RB1P06400 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 OR52B5P-204ENST00000641744 3467 ntBASIC7.16□□□□□ -1.26
RB1P06400 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.16□□□□□ -1.26
RB1P06400 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 SNORA38B-201ENST00000363524 131 ntBASIC7.16□□□□□ -1.26
RB1P06400 RNU1-84P-201ENST00000365447 164 ntBASIC7.16□□□□□ -1.26
RB1P06400 RN7SKP62-201ENST00000384539 329 ntBASIC7.16□□□□□ -1.26
RB1P06400 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.16□□□□□ -1.26
RB1P06400 AC017035.1-201ENST00000411999 1115 ntBASIC7.16□□□□□ -1.26
RB1P06400 NPM1P36-201ENST00000415681 835 ntBASIC7.16□□□□□ -1.26
RB1P06400 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.16□□□□□ -1.26
RB1P06400 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.16□□□□□ -1.26
RB1P06400 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.16□□□□□ -1.26
RB1P06400 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.16□□□□□ -1.26
RB1P06400 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RB1P06400 AC022616.2-201ENST00000523185 300 ntBASIC7.16□□□□□ -1.26
RB1P06400 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.16□□□□□ -1.26
RB1P06400 CYCSP25-201ENST00000525280 316 ntBASIC7.16□□□□□ -1.26
RB1P06400 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.16□□□□□ -1.26
RB1P06400 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.16□□□□□ -1.26
RB1P06400 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.16□□□□□ -1.26
RB1P06400 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC7.16□□□□□ -1.26
RB1P06400 RN7SL366P-201ENST00000577957 292 ntBASIC7.16□□□□□ -1.26
RB1P06400 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.16□□□□□ -1.26
RB1P06400 AL138895.2-201ENST00000603019 178 ntBASIC7.16□□□□□ -1.26
RB1P06400 AC137695.1-201ENST00000604126 489 ntBASIC7.16□□□□□ -1.26
RB1P06400 AC111186.1-201ENST00000604684 130 ntBASIC7.16□□□□□ -1.26
RB1P06400 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.16□□□□□ -1.26
RB1P06400 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.16□□□□□ -1.26
RB1P06400 SNORD96A-201ENST00000606577 79 ntBASIC7.16□□□□□ -1.26
RB1P06400 AC027348.2-201ENST00000624375 642 ntBASIC7.16□□□□□ -1.26
RB1P06400 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.16□□□□□ -1.26
RB1P06400 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.16□□□□□ -1.26
RB1P06400 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.16□□□□□ -1.26
RB1P06400 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RB1P06400 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.15□□□□□ -1.26
RB1P06400 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RB1P06400 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
RB1P06400 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RB1P06400 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RB1P06400 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RB1P06400 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
RB1P06400 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.15□□□□□ -1.26
RB1P06400 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
RB1P06400 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.15□□□□□ -1.26
RB1P06400 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.15□□□□□ -1.26
RB1P06400 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RB1P06400 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RB1P06400 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.15□□□□□ -1.26
RB1P06400 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.15□□□□□ -1.26
RB1P06400 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RB1P06400 SNORA70.3-201ENST00000365075 132 ntBASIC7.15□□□□□ -1.26
RB1P06400 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.15□□□□□ -1.26
RB1P06400 AL929472.1-201ENST00000417484 429 ntBASIC7.15□□□□□ -1.26
RB1P06400 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RB1P06400 VDAC1P2-201ENST00000423609 850 ntBASIC7.15□□□□□ -1.26
RB1P06400 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.15□□□□□ -1.26
RB1P06400 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC7.15□□□□□ -1.26
RB1P06400 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.15□□□□□ -1.26
RB1P06400 PMS2P9-201ENST00000441237 515 ntBASIC7.15□□□□□ -1.26
RB1P06400 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.15□□□□□ -1.26
RB1P06400 SNX18P25-201ENST00000510539 758 ntBASIC7.15□□□□□ -1.26
RB1P06400 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.15□□□□□ -1.26
RB1P06400 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.15□□□□□ -1.26
RB1P06400 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RB1P06400 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.15□□□□□ -1.26
RB1P06400 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.15□□□□□ -1.26
RB1P06400 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RB1P06400 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.15□□□□□ -1.26
RB1P06400 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.15□□□□□ -1.26
RB1P06400 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.15□□□□□ -1.26
RB1P06400 AL161912.3-201ENST00000605404 628 ntBASIC7.15□□□□□ -1.26
RB1P06400 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.15□□□□□ -1.26
RB1P06400 AC026951.2-201ENST00000613847 241 ntBASIC7.15□□□□□ -1.26
RB1P06400 MIR6729-201ENST00000618194 65 ntBASIC7.15□□□□□ -1.26
RB1P06400 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms