Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AL157831.2-201ENST00000564681 3095 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 SOCS5P5-201ENST00000402732 1586 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AL049634.1-201ENST00000453770 1720 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 MIR128-2-201ENST00000384893 84 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AL049697.3-201ENST00000406493 982 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 RPL31-202ENST00000409000 641 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 RN7SKP85-201ENST00000411349 318 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 IFNA12P-201ENST00000413147 571 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 PPIAP30-201ENST00000415473 519 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AL354868.1-201ENST00000417077 482 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 GYG1P2-201ENST00000426437 1006 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 EIF4A1P5-201ENST00000428062 1095 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 RPL5P2-201ENST00000429598 854 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 NQO1-204ENST00000439109 924 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 OR13K1P-201ENST00000444577 975 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 RPL5P10-201ENST00000445207 894 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 GTF2F2P2-201ENST00000445825 721 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 SCARNA6-201ENST00000515982 265 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 NXPE2P1-201ENST00000543705 726 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 BMS1P8-201ENST00000565049 1178 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 MIR4262-201ENST00000578394 54 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 RN7SL311P-201ENST00000579858 306 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AC233702.7-202ENST00000582941 211 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AC006335.3-201ENST00000613408 292 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AL606490.2-201ENST00000457562 1330 ntBASIC4.95□□□□□ -1.62
HLA-DQA1P01909 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1P01909 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1P01909 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms