Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 U91328.4-201ENST00000608919 517 ntBASIC5.99□□□□□ -1.45
H3F3AP84243 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.99□□□□□ -1.45
H3F3AP84243 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.99□□□□□ -1.45
H3F3AP84243 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.99□□□□□ -1.45
H3F3AP84243 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3AP84243 MIR6849-201ENST00000618543 69 ntBASIC5.99□□□□□ -1.45
H3F3AP84243 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.99□□□□□ -1.45
H3F3AP84243 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3AP84243 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3AP84243 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3AP84243 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3AP84243 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.99□□□□□ -1.45
H3F3AP84243 AC013268.3-201ENST00000262716 2324 ntBASIC5.99□□□□□ -1.45
H3F3AP84243 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3AP84243 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3AP84243 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3AP84243 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.99□□□□□ -1.45
H3F3AP84243 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3AP84243 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.99□□□□□ -1.45
H3F3AP84243 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.99□□□□□ -1.45
H3F3AP84243 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3AP84243 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3AP84243 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3AP84243 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
H3F3AP84243 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
H3F3AP84243 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.99□□□□□ -1.45
H3F3AP84243 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.99□□□□□ -1.45
H3F3AP84243 AL596244.1-201ENST00000567068 3779 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
H3F3AP84243 OR5M2P-202ENST00000641241 4242 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.98□□□□□ -1.45
H3F3AP84243 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC5.98□□□□□ -1.45
H3F3AP84243 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC5.98□□□□□ -1.45
H3F3AP84243 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3AP84243 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.98□□□□□ -1.45
H3F3AP84243 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.98□□□□□ -1.45
H3F3AP84243 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3AP84243 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3AP84243 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.98□□□□□ -1.45
H3F3AP84243 RN7SKP118-201ENST00000364331 330 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.98□□□□□ -1.45
H3F3AP84243 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.98□□□□□ -1.45
H3F3AP84243 AL353133.1-201ENST00000407695 401 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 RN7SKP296-201ENST00000411185 341 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.98□□□□□ -1.45
H3F3AP84243 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.98□□□□□ -1.45
H3F3AP84243 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.98□□□□□ -1.45
H3F3AP84243 RN7SL267P-201ENST00000485107 261 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
H3F3AP84243 AC093325.1-201ENST00000508378 326 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.98□□□□□ -1.45
H3F3AP84243 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.98□□□□□ -1.45
H3F3AP84243 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.98□□□□□ -1.45
H3F3AP84243 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.98□□□□□ -1.45
H3F3AP84243 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.98□□□□□ -1.45
H3F3AP84243 RPL7AP69-201ENST00000595306 806 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3AP84243 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
H3F3AP84243 AL035425.4-201ENST00000624509 1063 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.98□□□□□ -1.45
H3F3AP84243 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.98□□□□□ -1.45
H3F3AP84243 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3AP84243 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.98□□□□□ -1.45
H3F3AP84243 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3AP84243 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3AP84243 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3AP84243 ABCA11P-202ENST00000504019 2110 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 AC127070.3-201ENST00000503695 3263 ntBASIC5.98□□□□□ -1.45
H3F3AP84243 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3AP84243 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H3F3AP84243 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.98□□□□□ -1.45
H3F3AP84243 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.98□□□□□ -1.45
H3F3AP84243 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3AP84243 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3AP84243 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3AP84243 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
H3F3AP84243 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
H3F3AP84243 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3AP84243 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3AP84243 FDPSP5-201ENST00000399474 1057 ntBASIC5.97□□□□□ -1.45
H3F3AP84243 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3AP84243 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.97□□□□□ -1.45
H3F3AP84243 AP003385.1-201ENST00000426387 893 ntBASIC5.97□□□□□ -1.45
H3F3AP84243 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.97□□□□□ -1.45
H3F3AP84243 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.97□□□□□ -1.45
H3F3AP84243 HMGN1P32-201ENST00000441744 256 ntBASIC5.97□□□□□ -1.45
H3F3AP84243 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.97□□□□□ -1.45
H3F3AP84243 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.97□□□□□ -1.45
H3F3AP84243 RN7SKP198-201ENST00000459286 306 ntBASIC5.97□□□□□ -1.45
H3F3AP84243 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.97□□□□□ -1.45
H3F3AP84243 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.97□□□□□ -1.45
H3F3AP84243 RPL23AP68-201ENST00000480924 445 ntBASIC5.97□□□□□ -1.45
H3F3AP84243 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.97□□□□□ -1.45
H3F3AP84243 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.97□□□□□ -1.45
H3F3AP84243 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms