Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 LAMA4-205ENST00000389463 6297 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.87□□□□□ -1.31
BRCA2P51587 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 ZNF83-211ENST00000597597 4442 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 SRRM1P3-201ENST00000426911 2678 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 MIR141-201ENST00000384975 95 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.87□□□□□ -1.31
BRCA2P51587 VN1R54P-201ENST00000435210 1049 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 AL356981.1-201ENST00000454879 684 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 BX510359.5-201ENST00000515651 304 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.87□□□□□ -1.31
BRCA2P51587 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.87□□□□□ -1.31
BRCA2P51587 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.87□□□□□ -1.31
BRCA2P51587 RN7SL708P-201ENST00000580952 299 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
BRCA2P51587 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
BRCA2P51587 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 C14orf132-203ENST00000555004 7583 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.87□□□□□ -1.31
BRCA2P51587 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 AC023421.1-201ENST00000590535 1785 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 AC091544.5-201ENST00000620192 3815 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC6.87□□□□□ -1.31
BRCA2P51587 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.87□□□□□ -1.31
BRCA2P51587 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
BRCA2P51587 U3.2-201ENST00000362981 210 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 AC004453.1-201ENST00000487895 408 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 OR51A1P-201ENST00000511110 946 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 AP001858.2-201ENST00000536213 601 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC6.87□□□□□ -1.31
BRCA2P51587 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.87□□□□□ -1.31
BRCA2P51587 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.87□□□□□ -1.31
BRCA2P51587 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.87□□□□□ -1.31
BRCA2P51587 CASC19-264ENST00000641912 1184 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 MAPK10-262ENST00000641051 5738 ntBASIC6.87□□□□□ -1.31
BRCA2P51587 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 COL14A1-203ENST00000309791 6163 ntTSL 5 BASIC6.87□□□□□ -1.31
BRCA2P51587 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 SCN5A-205ENST00000423572 8362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
BRCA2P51587 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.86□□□□□ -1.31
BRCA2P51587 AC009963.2-201ENST00000453431 138 ntBASIC6.86□□□□□ -1.31
BRCA2P51587 AL133445.1-201ENST00000467051 452 ntBASIC6.86□□□□□ -1.31
BRCA2P51587 GTF2IP6-201ENST00000583143 541 ntBASIC6.86□□□□□ -1.31
BRCA2P51587 STAG1-210ENST00000629124 4322 ntTSL 5 BASIC6.86□□□□□ -1.31
BRCA2P51587 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.86□□□□□ -1.31
BRCA2P51587 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
BRCA2P51587 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.86□□□□□ -1.31
BRCA2P51587 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.86□□□□□ -1.31
BRCA2P51587 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
BRCA2P51587 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
BRCA2P51587 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.86□□□□□ -1.31
BRCA2P51587 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.86□□□□□ -1.31
BRCA2P51587 MIR4776-2-201ENST00000580204 80 ntBASIC6.86□□□□□ -1.31
BRCA2P51587 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.86□□□□□ -1.31
BRCA2P51587 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.86□□□□□ -1.31
BRCA2P51587 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.86□□□□□ -1.31
BRCA2P51587 AC005840.5-201ENST00000619166 599 ntBASIC6.86□□□□□ -1.31
BRCA2P51587 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.86□□□□□ -1.31
BRCA2P51587 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.86□□□□□ -1.31
BRCA2P51587 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.86□□□□□ -1.31
BRCA2P51587 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC6.86□□□□□ -1.31
BRCA2P51587 ICOSLG-204ENST00000407780 7080 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.86□□□□□ -1.31
BRCA2P51587 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC6.86□□□□□ -1.31
BRCA2P51587 RPL26P29-201ENST00000415623 438 ntBASIC6.86□□□□□ -1.31
BRCA2P51587 RPS26P13-201ENST00000419030 330 ntBASIC6.86□□□□□ -1.31
BRCA2P51587 AC114755.4-201ENST00000439114 443 ntBASIC6.86□□□□□ -1.31
BRCA2P51587 AL034399.1-201ENST00000451535 380 ntBASIC6.86□□□□□ -1.31
BRCA2P51587 IGLV2-34-201ENST00000490007 283 ntBASIC6.86□□□□□ -1.31
BRCA2P51587 AC122713.1-201ENST00000518368 1015 ntBASIC6.86□□□□□ -1.31
BRCA2P51587 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.86□□□□□ -1.31
BRCA2P51587 AC105105.5-201ENST00000622635 1294 ntBASIC6.86□□□□□ -1.31
BRCA2P51587 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.86□□□□□ -1.31
BRCA2P51587 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms