Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC8.52□□□□□ -1.05
ERCC3P19447 AL669942.2-201ENST00000620352 697 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 AC130448.2-201ENST00000624082 374 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ERCC3P19447 DDX43P1-201ENST00000510713 1763 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 AC006600.2-201ENST00000624834 2506 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ERCC3P19447 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ERCC3P19447 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC8.52□□□□□ -1.05
ERCC3P19447 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
ERCC3P19447 AL132656.3-201ENST00000606384 1595 ntBASIC8.52□□□□□ -1.05
ERCC3P19447 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ERCC3P19447 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ERCC3P19447 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.51□□□□□ -1.05
ERCC3P19447 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ERCC3P19447 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC8.51□□□□□ -1.05
ERCC3P19447 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.51□□□□□ -1.05
ERCC3P19447 AP000641.1-201ENST00000531988 1639 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.51□□□□□ -1.05
ERCC3P19447 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC8.51□□□□□ -1.05
ERCC3P19447 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
ERCC3P19447 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.51□□□□□ -1.05
ERCC3P19447 RBM5-AS1-201ENST00000630404 1386 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
ERCC3P19447 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ERCC3P19447 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ERCC3P19447 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
ERCC3P19447 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
ERCC3P19447 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
ERCC3P19447 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
ERCC3P19447 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
ERCC3P19447 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ERCC3P19447 RN7SKP28-201ENST00000364770 305 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
ERCC3P19447 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ERCC3P19447 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC8.51□□□□□ -1.05
ERCC3P19447 OR51B3P-201ENST00000412287 913 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AL445183.3-201ENST00000414168 502 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 BTF3P9-201ENST00000418784 283 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AC009506.2-201ENST00000420635 840 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC8.51□□□□□ -1.05
ERCC3P19447 OR7E117P-201ENST00000422682 1112 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AL160175.1-201ENST00000428124 247 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.51□□□□□ -1.05
ERCC3P19447 BX119904.1-201ENST00000432026 348 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC8.51□□□□□ -1.05
ERCC3P19447 AL604028.2-201ENST00000437848 788 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AC123904.1-201ENST00000441072 368 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AC079781.1-201ENST00000441505 394 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC8.51□□□□□ -1.05
ERCC3P19447 AL353898.1-201ENST00000444055 238 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC8.51□□□□□ -1.05
ERCC3P19447 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC8.51□□□□□ -1.05
ERCC3P19447 SS18L2P1-201ENST00000445923 213 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AC020779.1-201ENST00000478757 796 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC8.51□□□□□ -1.05
ERCC3P19447 RN7SL612P-201ENST00000497704 295 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 NPY6R-201ENST00000503807 1112 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 OR7E163P-201ENST00000505943 894 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 MRPS5P3-201ENST00000515577 166 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 IGHVII-51-2-201ENST00000519778 259 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 SDHCP4-201ENST00000532834 510 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC8.51□□□□□ -1.05
ERCC3P19447 CYB5AP5-201ENST00000549779 389 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC8.51□□□□□ -1.05
ERCC3P19447 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ERCC3P19447 DPPA3P2-202ENST00000557188 1219 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC8.51□□□□□ -1.05
ERCC3P19447 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC8.51□□□□□ -1.05
ERCC3P19447 RN7SL426P-201ENST00000579106 295 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC8.51□□□□□ -1.05
ERCC3P19447 AL023806.2-201ENST00000603042 263 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AC245407.2-201ENST00000614199 451 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 CYCSP41-201ENST00000616920 296 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC8.51□□□□□ -1.05
ERCC3P19447 AL138693.1-201ENST00000622219 129 ntBASIC8.51□□□□□ -1.05
ERCC3P19447 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.51□□□□□ -1.05
ERCC3P19447 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
ERCC3P19447 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
ERCC3P19447 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.51□□□□□ -1.05
ERCC3P19447 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ERCC3P19447 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC8.51□□□□□ -1.05
ERCC3P19447 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
ERCC3P19447 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ERCC3P19447 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ERCC3P19447 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ERCC3P19447 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.51□□□□□ -1.05
ERCC3P19447 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.5□□□□□ -1.05
ERCC3P19447 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.5□□□□□ -1.05
ERCC3P19447 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
ERCC3P19447 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.5□□□□□ -1.05
ERCC3P19447 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms