Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 WASF5P-205ENST00000428639 1455 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 HMGN1P6-201ENST00000438508 291 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.14□□□□□ -1.27
COL6A2P12110 Z99127.2-201ENST00000441426 334 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.14□□□□□ -1.27
COL6A2P12110 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.14□□□□□ -1.27
COL6A2P12110 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC7.14□□□□□ -1.27
COL6A2P12110 Z99714.1-201ENST00000450463 807 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.14□□□□□ -1.27
COL6A2P12110 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.14□□□□□ -1.27
COL6A2P12110 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.14□□□□□ -1.27
COL6A2P12110 AC022730.2-201ENST00000465359 452 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.14□□□□□ -1.27
COL6A2P12110 NPM1P29-201ENST00000483112 803 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AC127024.1-201ENST00000490847 418 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AL135933.1-201ENST00000498657 802 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC7.14□□□□□ -1.27
COL6A2P12110 MTCYBP35-201ENST00000503630 1137 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 HMGB1P47-201ENST00000511281 589 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AC114801.1-201ENST00000512633 297 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.14□□□□□ -1.27
COL6A2P12110 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC7.14□□□□□ -1.27
COL6A2P12110 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.14□□□□□ -1.27
COL6A2P12110 RN7SKP233-201ENST00000517005 110 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC7.14□□□□□ -1.27
COL6A2P12110 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC7.14□□□□□ -1.27
COL6A2P12110 OR56A7P-201ENST00000524865 941 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 OR4V1P-201ENST00000525394 1140 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.14□□□□□ -1.27
COL6A2P12110 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC7.14□□□□□ -1.27
COL6A2P12110 GLRXP2-201ENST00000555594 321 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.14□□□□□ -1.27
COL6A2P12110 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC7.14□□□□□ -1.27
COL6A2P12110 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 AC136944.5-201ENST00000573021 151 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC7.14□□□□□ -1.27
COL6A2P12110 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.14□□□□□ -1.27
COL6A2P12110 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC7.14□□□□□ -1.27
COL6A2P12110 AC008751.2-201ENST00000597885 980 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 PCF11-AS1-201ENST00000602322 1516 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AP005229.2-201ENST00000609980 697 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AL353898.2-201ENST00000623000 255 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 AL035425.4-201ENST00000624509 1063 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.14□□□□□ -1.27
COL6A2P12110 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.14□□□□□ -1.27
COL6A2P12110 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.14□□□□□ -1.27
COL6A2P12110 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.14□□□□□ -1.27
COL6A2P12110 SAMMSON-203ENST00000641005 2168 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.14□□□□□ -1.27
COL6A2P12110 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
COL6A2P12110 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.14□□□□□ -1.27
COL6A2P12110 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.14□□□□□ -1.27
COL6A2P12110 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL6A2P12110 NBPF8-201ENST00000583271 5330 ntBASIC7.14□□□□□ -1.27
COL6A2P12110 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.13□□□□□ -1.27
COL6A2P12110 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC7.13□□□□□ -1.27
COL6A2P12110 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.13□□□□□ -1.27
COL6A2P12110 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.13□□□□□ -1.27
COL6A2P12110 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL6A2P12110 AC104837.1-201ENST00000444644 1587 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 AL157713.1-201ENST00000379752 1531 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 TCP1P3-201ENST00000414406 1498 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.13□□□□□ -1.27
COL6A2P12110 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC7.13□□□□□ -1.27
COL6A2P12110 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 SLC9B1P3-201ENST00000452667 1334 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
COL6A2P12110 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 RNA5SP483-201ENST00000363431 118 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 SNORA35-201ENST00000386104 128 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
COL6A2P12110 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.13□□□□□ -1.27
COL6A2P12110 AL592310.1-201ENST00000414330 671 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
COL6A2P12110 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.13□□□□□ -1.27
COL6A2P12110 MTND2P21-201ENST00000436242 1042 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 OR3B1P-201ENST00000437536 893 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.13□□□□□ -1.27
COL6A2P12110 CYP2C56P-201ENST00000440076 291 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC7.13□□□□□ -1.27
COL6A2P12110 PRDX1P1-201ENST00000449329 596 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 RN7SL834P-201ENST00000461450 286 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 RN7SL797P-201ENST00000486314 297 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 RPS4XP23-201ENST00000487801 237 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 AP005202.1-201ENST00000489915 867 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms