Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.9□□□□□ -1.3
RETP07949 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
RETP07949 AC007679.3-201ENST00000434035 414 ntBASIC6.9□□□□□ -1.3
RETP07949 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.9□□□□□ -1.3
RETP07949 ARMC4P1-201ENST00000438905 707 ntBASIC6.9□□□□□ -1.3
RETP07949 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.9□□□□□ -1.3
RETP07949 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RETP07949 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RETP07949 GAPDHP20-201ENST00000444107 1007 ntBASIC6.9□□□□□ -1.3
RETP07949 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.9□□□□□ -1.3
RETP07949 AC117395.2-201ENST00000463122 1128 ntBASIC6.9□□□□□ -1.3
RETP07949 RPL23P10-201ENST00000468780 412 ntBASIC6.9□□□□□ -1.3
RETP07949 RN7SL654P-201ENST00000479178 292 ntBASIC6.9□□□□□ -1.3
RETP07949 RN7SL413P-201ENST00000482700 297 ntBASIC6.9□□□□□ -1.3
RETP07949 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.9□□□□□ -1.3
RETP07949 HMGN1P16-201ENST00000508308 283 ntBASIC6.9□□□□□ -1.3
RETP07949 SCARNA21.2-201ENST00000516600 166 ntBASIC6.9□□□□□ -1.3
RETP07949 RPL10P18-201ENST00000519384 309 ntBASIC6.9□□□□□ -1.3
RETP07949 IGLVV-66-201ENST00000523818 341 ntBASIC6.9□□□□□ -1.3
RETP07949 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.9□□□□□ -1.3
RETP07949 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.9□□□□□ -1.3
RETP07949 AC005519.1-201ENST00000554490 601 ntBASIC6.9□□□□□ -1.3
RETP07949 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.9□□□□□ -1.3
RETP07949 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.9□□□□□ -1.3
RETP07949 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.9□□□□□ -1.3
RETP07949 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.9□□□□□ -1.3
RETP07949 AC010463.3-201ENST00000594077 500 ntBASIC6.9□□□□□ -1.3
RETP07949 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.9□□□□□ -1.3
RETP07949 AC063962.1-201ENST00000608199 521 ntBASIC6.9□□□□□ -1.3
RETP07949 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.9□□□□□ -1.3
RETP07949 AC183089.2-201ENST00000637931 916 ntBASIC6.9□□□□□ -1.3
RETP07949 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RETP07949 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.9□□□□□ -1.31
RETP07949 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.9□□□□□ -1.31
RETP07949 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RETP07949 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RETP07949 Z93929.1-201ENST00000418200 1475 ntBASIC6.9□□□□□ -1.31
RETP07949 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RETP07949 ATP5BP1-201ENST00000411980 1574 ntBASIC6.9□□□□□ -1.31
RETP07949 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
RETP07949 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
RETP07949 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RETP07949 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
RETP07949 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
RETP07949 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.9□□□□□ -1.31
RETP07949 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
RETP07949 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RETP07949 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.89□□□□□ -1.31
RETP07949 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
RETP07949 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.89□□□□□ -1.31
RETP07949 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RETP07949 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.89□□□□□ -1.31
RETP07949 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RETP07949 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RETP07949 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.89□□□□□ -1.31
RETP07949 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RETP07949 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
RETP07949 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RETP07949 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RETP07949 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.89□□□□□ -1.31
RETP07949 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.89□□□□□ -1.31
RETP07949 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.89□□□□□ -1.31
RETP07949 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.89□□□□□ -1.31
RETP07949 AC099340.1-201ENST00000475247 599 ntBASIC6.89□□□□□ -1.31
RETP07949 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.89□□□□□ -1.31
RETP07949 RPL5P11-201ENST00000498068 893 ntBASIC6.89□□□□□ -1.31
RETP07949 AC002456.2-201ENST00000509356 380 ntBASIC6.89□□□□□ -1.31
RETP07949 AC087752.2-201ENST00000521219 281 ntBASIC6.89□□□□□ -1.31
RETP07949 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RETP07949 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.89□□□□□ -1.31
RETP07949 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RETP07949 AC015801.1-201ENST00000585651 153 ntBASIC6.89□□□□□ -1.31
RETP07949 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.89□□□□□ -1.31
RETP07949 AC013731.1-201ENST00000604340 883 ntBASIC6.89□□□□□ -1.31
RETP07949 AL136097.3-201ENST00000611097 505 ntBASIC6.89□□□□□ -1.31
RETP07949 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.89□□□□□ -1.31
RETP07949 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.89□□□□□ -1.31
RETP07949 AC004241.2-201ENST00000614562 444 ntBASIC6.89□□□□□ -1.31
RETP07949 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.89□□□□□ -1.31
RETP07949 AL109924.4-201ENST00000623089 670 ntBASIC6.89□□□□□ -1.31
RETP07949 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.89□□□□□ -1.31
RETP07949 MIR4302-201ENST00000638058 60 ntBASIC6.89□□□□□ -1.31
RETP07949 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RETP07949 CASC19-243ENST00000641588 1546 ntBASIC6.89□□□□□ -1.31
RETP07949 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.89□□□□□ -1.31
RETP07949 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RETP07949 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
RETP07949 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RETP07949 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RETP07949 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.89□□□□□ -1.31
RETP07949 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.89□□□□□ -1.31
RETP07949 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
RETP07949 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
RETP07949 MAPK10-365ENST00000641902 3825 ntBASIC6.88□□□□□ -1.31
RETP07949 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.88□□□□□ -1.31
RETP07949 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.88□□□□□ -1.31
RETP07949 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
RETP07949 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RETP07949 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.88□□□□□ -1.31
RETP07949 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms