Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 UBE2CP4-201ENST00000561405 535 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC012065.3-201ENST00000602736 439 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AL023806.2-201ENST00000603042 263 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC068802.1-201ENST00000603420 732 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AP001554.1-201ENST00000604533 376 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AL139123.1-201ENST00000612008 430 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC007671.1-201ENST00000616957 830 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC127071.1-201ENST00000624997 712 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AL139254.2-202ENST00000641937 1156 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 BRD7P1-201ENST00000557705 1915 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AC022034.1-201ENST00000512867 2156 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 RN7SKP184-201ENST00000362348 333 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 RPL9P21-201ENST00000392269 505 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 RN7SKP271-201ENST00000410528 320 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 SNX18P13-201ENST00000412442 529 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 EEF1B2P8-201ENST00000414101 671 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 PPIAP30-201ENST00000415473 519 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 TAS2R2P-201ENST00000421146 910 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 PPIL1P1-201ENST00000423936 499 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 UQCRHP1-204ENST00000424609 274 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 OR51P1P-201ENST00000447547 942 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 MTND2P25-201ENST00000449028 610 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 MTND2P30-201ENST00000456663 382 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 EIF3LP2-201ENST00000457262 807 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 EIF4E2P2-201ENST00000492033 736 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AC016559.1-201ENST00000511420 199 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AC073581.1-201ENST00000519036 575 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 SNORA70D-201ENST00000578836 135 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 MIR1273F-201ENST00000580581 99 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AP006587.6-201ENST00000582128 1091 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 OR1AB1P-201ENST00000585564 761 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 EXOSC3P2-201ENST00000594464 497 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AC131009.3-201ENST00000621809 287 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AC106782.7-201ENST00000624024 418 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AC133555.5-201ENST00000624430 418 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AL136531.3-201ENST00000624378 3658 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AC007998.4-201ENST00000612496 2533 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 AP005139.1-201ENST00000580702 1647 ntBASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.54□□□□□ -1.36
AMBRA1Q9C0C7 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 QRSL1P3-201ENST00000552666 1316 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms