Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CEP57L1-205ENST00000517392 2771 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 TRIM60P19-201ENST00000452879 1462 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC073342.2-201ENST00000595842 1800 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 AL109811.4-201ENST00000614757 1793 ntTSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 HERC2P5-201ENST00000562687 3825 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 Z97200.1-201ENST00000606154 2045 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 OR2A20P-201ENST00000479887 2913 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 PXYLP1-207ENST00000508812 4158 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 CSTL1-201ENST00000246020 510 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 RPL32-201ENST00000273223 567 ntTSL 3 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 CRIP3-201ENST00000274990 800 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 AZI2-202ENST00000334100 943 ntTSL 3 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 CSTL1-202ENST00000347397 736 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 UBE2D3-205ENST00000350435 711 ntTSL 2 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 RNA5SP452-201ENST00000363004 119 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 Y_RNA.132-201ENST00000363421 102 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 SNORA63C-201ENST00000364578 129 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 SNORA75.4-201ENST00000391278 119 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC104297.1-201ENST00000393779 870 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC025750.1-201ENST00000399891 379 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 MAPRE3-202ENST00000402218 1001 ntTSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 AP000357.1-201ENST00000409926 1165 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 RPL26P29-201ENST00000415623 438 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 PDCL2P1-201ENST00000419302 352 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 CHCHD3P1-201ENST00000425516 676 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 GPM6BP2-201ENST00000432046 144 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 CRIP1P4-201ENST00000442565 229 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 RPS26P30-201ENST00000443431 335 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 MICC-201ENST00000445710 1055 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 GPM6BP1-201ENST00000446387 144 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 OR11Q1P-201ENST00000451582 877 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 CALM1P2-201ENST00000452941 448 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 DEFA10P-201ENST00000455014 288 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC023598.1-201ENST00000472521 361 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC018639.1-201ENST00000492994 442 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 PRPS1L1-201ENST00000506618 1090 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 MRPS18C-205ENST00000507349 350 ntTSL 3 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 AP000879.1-201ENST00000526174 976 ntTSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 AP003064.2-201ENST00000528983 510 ntTSL 3 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 OR6M2P-201ENST00000529831 871 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC004801.5-201ENST00000552958 550 ntTSL 4 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC009432.1-201ENST00000560391 648 ntTSL 3 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 MKRN2OS-203ENST00000564146 985 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 VN1R67P-201ENST00000568379 913 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AL163952.1-202ENST00000569625 600 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC118754.2-201ENST00000574133 537 ntTSL 4 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 KIR3DP1-201ENST00000580853 628 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 GAPLINC-203ENST00000581029 613 ntTSL 3 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 RN7SL198P-201ENST00000583190 258 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 RN7SL731P-201ENST00000584329 293 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 FAM95B1-210ENST00000591605 743 ntTSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 ZNF528-210ENST00000594530 544 ntTSL 3 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 AL355802.3-201ENST00000607571 545 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 uc_338.23-201ENST00000614169 164 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 STMN1P1-201ENST00000617809 440 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC145285.8-201ENST00000619561 255 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC006504.8-201ENST00000621046 635 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC100757.2-201ENST00000622316 280 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC025279.3-201ENST00000622398 104 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AL158801.5-201ENST00000623123 465 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 RPL23AP61-201ENST00000623642 466 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 LIMCH1-215ENST00000512632 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 CHRNA6-205ENST00000534622 1872 ntTSL 2 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 ZNF157-201ENST00000377073 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 TRY2P-202ENST00000616556 2039 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 ZNF887P-201ENST00000431363 1407 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms