Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.96□□□□□ -1.13
SNED1Q8TER0 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
SNED1Q8TER0 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SNED1Q8TER0 MFSD8-217ENST00000641178 4374 ntBASIC7.96□□□□□ -1.13
SNED1Q8TER0 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
SNED1Q8TER0 RN7SKP81-201ENST00000365603 331 ntBASIC7.96□□□□□ -1.13
SNED1Q8TER0 AC087752.1-201ENST00000391360 558 ntBASIC7.96□□□□□ -1.13
SNED1Q8TER0 TVP23CP1-201ENST00000450317 639 ntBASIC7.96□□□□□ -1.13
SNED1Q8TER0 RPS26P39-201ENST00000469206 341 ntBASIC7.96□□□□□ -1.13
SNED1Q8TER0 AC007998.1-201ENST00000474156 672 ntBASIC7.96□□□□□ -1.13
SNED1Q8TER0 RPL12P31-201ENST00000478433 450 ntBASIC7.96□□□□□ -1.13
SNED1Q8TER0 RN7SL273P-201ENST00000481561 299 ntBASIC7.96□□□□□ -1.13
SNED1Q8TER0 RN7SL382P-201ENST00000482631 282 ntBASIC7.96□□□□□ -1.13
SNED1Q8TER0 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.96□□□□□ -1.13
SNED1Q8TER0 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.96□□□□□ -1.13
SNED1Q8TER0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.96□□□□□ -1.13
SNED1Q8TER0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.96□□□□□ -1.13
SNED1Q8TER0 AC068768.2-201ENST00000602352 343 ntBASIC7.96□□□□□ -1.13
SNED1Q8TER0 AC026951.2-201ENST00000613847 241 ntBASIC7.96□□□□□ -1.13
SNED1Q8TER0 AF131215.2-201ENST00000531549 1710 ntBASIC7.96□□□□□ -1.13
SNED1Q8TER0 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
SNED1Q8TER0 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SNED1Q8TER0 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.96□□□□□ -1.13
SNED1Q8TER0 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SNED1Q8TER0 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.96□□□□□ -1.13
SNED1Q8TER0 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.96□□□□□ -1.13
SNED1Q8TER0 AP003486.1-201ENST00000525716 3994 ntBASIC7.96□□□□□ -1.13
SNED1Q8TER0 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
SNED1Q8TER0 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNED1Q8TER0 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNED1Q8TER0 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.96□□□□□ -1.14
SNED1Q8TER0 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SNED1Q8TER0 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.96□□□□□ -1.14
SNED1Q8TER0 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SNED1Q8TER0 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNED1Q8TER0 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC7.96□□□□□ -1.14
SNED1Q8TER0 AL136984.1-201ENST00000607611 1893 ntBASIC7.96□□□□□ -1.14
SNED1Q8TER0 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.96□□□□□ -1.14
SNED1Q8TER0 AC093225.1-201ENST00000506867 1408 ntBASIC7.96□□□□□ -1.14
SNED1Q8TER0 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
SNED1Q8TER0 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.96□□□□□ -1.14
SNED1Q8TER0 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.96□□□□□ -1.14
SNED1Q8TER0 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.96□□□□□ -1.14
SNED1Q8TER0 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.96□□□□□ -1.14
SNED1Q8TER0 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SNED1Q8TER0 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SNED1Q8TER0 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.96□□□□□ -1.14
SNED1Q8TER0 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
SNED1Q8TER0 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 RNA5SP477-201ENST00000362639 119 ntBASIC7.95□□□□□ -1.14
SNED1Q8TER0 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 BX510359.3-201ENST00000422168 306 ntBASIC7.95□□□□□ -1.14
SNED1Q8TER0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 NPM1P19-201ENST00000450070 712 ntBASIC7.95□□□□□ -1.14
SNED1Q8TER0 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 OR4D12P-201ENST00000509361 911 ntBASIC7.95□□□□□ -1.14
SNED1Q8TER0 MTATP6P1-201ENST00000514057 681 ntBASIC7.95□□□□□ -1.14
SNED1Q8TER0 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 AC068305.2-201ENST00000550567 1205 ntBASIC7.95□□□□□ -1.14
SNED1Q8TER0 NPIPB1P-202ENST00000588786 828 ntBASIC7.95□□□□□ -1.14
SNED1Q8TER0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 MTCO1P11-201ENST00000429111 1528 ntBASIC7.95□□□□□ -1.14
SNED1Q8TER0 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 AL353743.3-201ENST00000442109 1468 ntBASIC7.95□□□□□ -1.14
SNED1Q8TER0 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 SMG1P5-202ENST00000529428 4219 ntBASIC7.95□□□□□ -1.14
SNED1Q8TER0 SMG1P2-201ENST00000566127 4221 ntBASIC7.95□□□□□ -1.14
SNED1Q8TER0 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNED1Q8TER0 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
SNED1Q8TER0 SUGT1P2-201ENST00000379452 992 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms