Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AP003115.1-201ENST00000569849 463 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AC233699.1-201ENST00000569955 1168 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 ARGFXP2-201ENST00000579304 949 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AL390877.1-201ENST00000605704 214 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AL008582.1-201ENST00000609612 442 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 MIR6503-201ENST00000622884 86 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 LCOR-201ENST00000286067 4542 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AC007485.2-201ENST00000623493 1667 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 MAPK10-365ENST00000641902 3825 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 MTCO1P25-201ENST00000414449 1799 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 U3.52-201ENST00000384034 216 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 MIR551B-201ENST00000384984 96 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AL049697.3-201ENST00000406493 982 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 UBTFL2-201ENST00000411859 1191 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 HSPE1P27-201ENST00000430808 296 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 CEACAMP11-201ENST00000455211 583 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AC023818.1-201ENST00000498379 384 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 RN7SL66P-201ENST00000582099 264 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AC015818.6-201ENST00000584274 634 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AC005479.3-201ENST00000602790 431 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AC012175.1-201ENST00000603755 531 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AC013731.1-201ENST00000604340 883 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AC093635.1-201ENST00000609028 555 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AC073488.9-201ENST00000631601 754 ntBASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
C9orf40Q8IXQ3 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
C9orf40Q8IXQ3 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
C9orf40Q8IXQ3 OR2AH1P-202ENST00000641232 2744 ntBASIC6.15□□□□□ -1.43
C9orf40Q8IXQ3 AL136531.3-201ENST00000624378 3658 ntBASIC6.15□□□□□ -1.43
C9orf40Q8IXQ3 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
C9orf40Q8IXQ3 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.15□□□□□ -1.43
C9orf40Q8IXQ3 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
C9orf40Q8IXQ3 AC105114.1-201ENST00000624795 1862 ntBASIC6.15□□□□□ -1.43
C9orf40Q8IXQ3 RBPJP6-201ENST00000411556 1431 ntBASIC6.15□□□□□ -1.43
C9orf40Q8IXQ3 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
C9orf40Q8IXQ3 OR52B5P-204ENST00000641744 3467 ntBASIC6.15□□□□□ -1.43
C9orf40Q8IXQ3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
C9orf40Q8IXQ3 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AL669831.5-218ENST00000591702 1873 ntBASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AC064862.5-201ENST00000440618 334 ntBASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AL031681.1-201ENST00000443304 400 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms