Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SPATA31C2-201ENST00000324915 3777 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 CTAGE11P-201ENST00000451540 2353 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 SNORA70.8-201ENST00000384231 136 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 RNA5SP177-201ENST00000410122 107 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 PTP4A1P3-201ENST00000433661 420 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 GAPDHP75-201ENST00000433910 943 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 EIF2S2P2-201ENST00000447161 982 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC073072.2-201ENST00000447425 348 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC234771.3-201ENST00000454984 622 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 RN7SL776P-201ENST00000493390 268 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AP005597.2-201ENST00000526238 341 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 MTATP6P15-201ENST00000527233 835 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC118942.1-201ENST00000529674 1035 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 OR4A41P-201ENST00000533053 928 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC087894.1-201ENST00000538359 518 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC126177.6-201ENST00000550420 1009 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 MTCYBP28-201ENST00000566728 1132 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC005951.1-201ENST00000576706 485 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 RPP40P2-201ENST00000603596 712 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 COX6CP16-201ENST00000603667 216 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC027271.1-201ENST00000610270 610 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC099667.1-201ENST00000624222 469 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC073488.2-201ENST00000631903 751 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC243725.1-201ENST00000637164 436 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AL034408.1-201ENST00000637712 664 ntBASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM48Q8IWZ4 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 MFSD8-256ENST00000641949 1640 ntBASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 FAUP2-201ENST00000394301 401 ntBASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 AL593856.1-201ENST00000419949 805 ntBASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 AC009303.1-201ENST00000426307 352 ntBASIC7.1□□□□□ -1.27
TRIM48Q8IWZ4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms