Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
FOXR1Q6PIV2 AC034111.1-201ENST00000562143 3770 ntBASIC8.3□□□□□ -1.08
FOXR1Q6PIV2 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.3□□□□□ -1.08
FOXR1Q6PIV2 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
FOXR1Q6PIV2 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
FOXR1Q6PIV2 MTND5P23-201ENST00000430812 1655 ntBASIC8.3□□□□□ -1.08
FOXR1Q6PIV2 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
FOXR1Q6PIV2 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.3□□□□□ -1.08
FOXR1Q6PIV2 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 SLC9B1P3-201ENST00000452667 1334 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 SETP22-201ENST00000412243 957 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 MTCYBP38-201ENST00000417160 1123 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AL357632.1-201ENST00000426688 643 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC013467.1-201ENST00000430717 1041 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 FDPSP8-201ENST00000438304 1089 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 RAB11AP1-201ENST00000442978 646 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 RNF148-202ENST00000447240 839 ntTSL 2 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC105393.1-202ENST00000449621 598 ntTSL 3 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC003071.1-201ENST00000451219 789 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 SUMO2P2-201ENST00000456482 255 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 RN7SL854P-201ENST00000459767 295 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 OR9A3P-202ENST00000485185 878 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC090835.1-201ENST00000515189 1024 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 RNU6-507P-201ENST00000516045 100 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AKIRIN1P1-201ENST00000547384 544 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 OR11J5P-201ENST00000556889 934 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 MIR6736-201ENST00000616799 59 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC112204.3-201ENST00000623822 332 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 FRG1DP-201ENST00000635586 771 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC011447.6-201ENST00000623510 2598 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC107980.1-201ENST00000558671 3355 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 AC098614.1-202ENST00000634895 1830 ntBASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
FOXR1Q6PIV2 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 AL139805.2-201ENST00000455305 2433 ntBASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 PDZK1P1-202ENST00000425209 1350 ntBASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 CASR-201ENST00000490131 4015 ntTSL 5 BASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 AL138847.1-201ENST00000258651 546 ntBASIC8.28□□□□□ -1.08
FOXR1Q6PIV2 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms