Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.06□□□□□ -1.28
LHX1P48742 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC7.06□□□□□ -1.28
LHX1P48742 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.06□□□□□ -1.28
LHX1P48742 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
LHX1P48742 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC7.06□□□□□ -1.28
LHX1P48742 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LHX1P48742 AC026956.1-201ENST00000558741 396 ntBASIC7.06□□□□□ -1.28
LHX1P48742 AC092718.4-201ENST00000566639 716 ntBASIC7.06□□□□□ -1.28
LHX1P48742 ADAM3B-201ENST00000569937 840 ntBASIC7.06□□□□□ -1.28
LHX1P48742 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.06□□□□□ -1.28
LHX1P48742 WBP1LP11-201ENST00000586141 328 ntBASIC7.06□□□□□ -1.28
LHX1P48742 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.06□□□□□ -1.28
LHX1P48742 SNORD96A-201ENST00000606577 79 ntBASIC7.06□□□□□ -1.28
LHX1P48742 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX1P48742 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.06□□□□□ -1.28
LHX1P48742 AL008582.1-201ENST00000609612 442 ntBASIC7.06□□□□□ -1.28
LHX1P48742 AC068726.1-201ENST00000610993 341 ntBASIC7.06□□□□□ -1.28
LHX1P48742 AL354718.1-201ENST00000619764 589 ntBASIC7.06□□□□□ -1.28
LHX1P48742 AC011379.1-201ENST00000508713 3025 ntBASIC7.06□□□□□ -1.28
LHX1P48742 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX1P48742 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX1P48742 SMG1P5-202ENST00000529428 4219 ntBASIC7.06□□□□□ -1.28
LHX1P48742 SMG1P2-201ENST00000566127 4221 ntBASIC7.06□□□□□ -1.28
LHX1P48742 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
LHX1P48742 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX1P48742 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LHX1P48742 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX1P48742 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.06□□□□□ -1.28
LHX1P48742 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LHX1P48742 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
LHX1P48742 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LHX1P48742 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
LHX1P48742 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
LHX1P48742 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LHX1P48742 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LHX1P48742 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
LHX1P48742 NEK2P4-201ENST00000425793 1329 ntBASIC7.05□□□□□ -1.28
LHX1P48742 AL512310.3-201ENST00000547023 1335 ntBASIC7.05□□□□□ -1.28
LHX1P48742 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
LHX1P48742 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LHX1P48742 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
LHX1P48742 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.05□□□□□ -1.28
LHX1P48742 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LHX1P48742 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.05□□□□□ -1.28
LHX1P48742 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.05□□□□□ -1.28
LHX1P48742 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
LHX1P48742 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.05□□□□□ -1.28
LHX1P48742 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LHX1P48742 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LHX1P48742 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.05□□□□□ -1.28
LHX1P48742 RN7SKP188-201ENST00000410789 317 ntBASIC7.05□□□□□ -1.28
LHX1P48742 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC7.05□□□□□ -1.28
LHX1P48742 OR6R1P-201ENST00000431838 940 ntBASIC7.05□□□□□ -1.28
LHX1P48742 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.05□□□□□ -1.28
LHX1P48742 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.05□□□□□ -1.28
LHX1P48742 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.05□□□□□ -1.28
LHX1P48742 RPS7P10-201ENST00000464254 603 ntBASIC7.05□□□□□ -1.28
LHX1P48742 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC7.05□□□□□ -1.28
LHX1P48742 AC044810.1-201ENST00000480271 711 ntBASIC7.05□□□□□ -1.28
LHX1P48742 AC092349.1-201ENST00000504903 310 ntBASIC7.05□□□□□ -1.28
LHX1P48742 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.05□□□□□ -1.28
LHX1P48742 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.05□□□□□ -1.28
LHX1P48742 BMS1P16-201ENST00000556075 1147 ntBASIC7.05□□□□□ -1.28
LHX1P48742 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC7.05□□□□□ -1.28
LHX1P48742 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.05□□□□□ -1.28
LHX1P48742 AC130448.2-201ENST00000624082 374 ntBASIC7.05□□□□□ -1.28
LHX1P48742 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LHX1P48742 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LHX1P48742 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
LHX1P48742 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.05□□□□□ -1.28
LHX1P48742 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
LHX1P48742 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LHX1P48742 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
LHX1P48742 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LHX1P48742 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.04□□□□□ -1.28
LHX1P48742 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.04□□□□□ -1.28
LHX1P48742 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LHX1P48742 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LHX1P48742 AC007485.2-201ENST00000623493 1667 ntBASIC7.04□□□□□ -1.28
LHX1P48742 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.04□□□□□ -1.28
LHX1P48742 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LHX1P48742 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
LHX1P48742 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LHX1P48742 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.04□□□□□ -1.28
LHX1P48742 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.04□□□□□ -1.28
LHX1P48742 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.04□□□□□ -1.28
LHX1P48742 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.04□□□□□ -1.28
LHX1P48742 GPN3P1-201ENST00000423883 535 ntBASIC7.04□□□□□ -1.28
LHX1P48742 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.04□□□□□ -1.28
LHX1P48742 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.04□□□□□ -1.28
LHX1P48742 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.04□□□□□ -1.28
LHX1P48742 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.04□□□□□ -1.28
LHX1P48742 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.04□□□□□ -1.28
LHX1P48742 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.04□□□□□ -1.28
LHX1P48742 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.04□□□□□ -1.28
LHX1P48742 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC7.04□□□□□ -1.28
LHX1P48742 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.04□□□□□ -1.28
LHX1P48742 AC037479.1-201ENST00000558361 625 ntBASIC7.04□□□□□ -1.28
LHX1P48742 SYPL1P2-201ENST00000582878 727 ntBASIC7.04□□□□□ -1.28
LHX1P48742 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms