Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RN7SL778P-201ENST00000607160 297 ntBASIC6.04□□□□□ -1.44
SOX2P48431 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 OR7M1P-201ENST00000608946 533 ntBASIC6.04□□□□□ -1.44
SOX2P48431 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX2P48431 AL391834.2-201ENST00000609982 546 ntBASIC6.04□□□□□ -1.44
SOX2P48431 FAM27E3-202ENST00000614611 340 ntBASIC6.04□□□□□ -1.44
SOX2P48431 uc_338.37-201ENST00000620113 186 ntBASIC6.04□□□□□ -1.44
SOX2P48431 AC013489.3-201ENST00000623274 517 ntBASIC6.04□□□□□ -1.44
SOX2P48431 AC120057.5-201ENST00000623840 154 ntBASIC6.04□□□□□ -1.44
SOX2P48431 AC073857.1-201ENST00000625082 1054 ntBASIC6.04□□□□□ -1.44
SOX2P48431 AC022905.1-201ENST00000503430 3048 ntBASIC6.04□□□□□ -1.44
SOX2P48431 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX2P48431 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SOX2P48431 AC005618.1-201ENST00000606901 3148 ntBASIC6.04□□□□□ -1.44
SOX2P48431 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX2P48431 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 AC022507.1-201ENST00000548349 1505 ntBASIC6.04□□□□□ -1.44
SOX2P48431 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.04□□□□□ -1.44
SOX2P48431 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX2P48431 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SOX2P48431 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.03□□□□□ -1.44
SOX2P48431 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX2P48431 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX2P48431 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX2P48431 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SOX2P48431 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SOX2P48431 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.03□□□□□ -1.44
SOX2P48431 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX2P48431 RNA5SP65-201ENST00000363166 119 ntBASIC6.03□□□□□ -1.44
SOX2P48431 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SOX2P48431 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX2P48431 HNRNPCP2-201ENST00000399515 881 ntBASIC6.03□□□□□ -1.44
SOX2P48431 AC009237.9-201ENST00000414800 347 ntBASIC6.03□□□□□ -1.44
SOX2P48431 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX2P48431 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.03□□□□□ -1.44
SOX2P48431 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX2P48431 MRPS33P4-201ENST00000434892 317 ntBASIC6.03□□□□□ -1.44
SOX2P48431 AC009237.4-201ENST00000441078 238 ntBASIC6.03□□□□□ -1.44
SOX2P48431 ARMC8P1-201ENST00000443069 1289 ntBASIC6.03□□□□□ -1.44
SOX2P48431 RPL21P33-201ENST00000444831 484 ntBASIC6.03□□□□□ -1.44
SOX2P48431 SCDP1-201ENST00000455244 1081 ntBASIC6.03□□□□□ -1.44
SOX2P48431 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX2P48431 RN7SL775P-201ENST00000498361 336 ntBASIC6.03□□□□□ -1.44
SOX2P48431 AC010374.2-201ENST00000512933 535 ntBASIC6.03□□□□□ -1.44
SOX2P48431 AC117383.2-201ENST00000514722 322 ntBASIC6.03□□□□□ -1.44
SOX2P48431 AC027338.1-201ENST00000514840 825 ntBASIC6.03□□□□□ -1.44
SOX2P48431 SCARNA6-201ENST00000515982 265 ntBASIC6.03□□□□□ -1.44
SOX2P48431 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX2P48431 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX2P48431 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX2P48431 AP006587.5-201ENST00000532033 739 ntBASIC6.03□□□□□ -1.44
SOX2P48431 OR7E1P-201ENST00000533891 958 ntBASIC6.03□□□□□ -1.44
SOX2P48431 AC068790.1-201ENST00000536166 355 ntBASIC6.03□□□□□ -1.44
SOX2P48431 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX2P48431 AC027667.1-201ENST00000545814 304 ntBASIC6.03□□□□□ -1.44
SOX2P48431 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SOX2P48431 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX2P48431 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX2P48431 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX2P48431 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX2P48431 AC244034.2-201ENST00000562504 509 ntBASIC6.03□□□□□ -1.44
SOX2P48431 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX2P48431 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX2P48431 AP001120.4-201ENST00000590231 108 ntBASIC6.03□□□□□ -1.44
SOX2P48431 FAM60CP-201ENST00000591086 664 ntBASIC6.03□□□□□ -1.44
SOX2P48431 VN1R81P-201ENST00000602085 372 ntBASIC6.03□□□□□ -1.44
SOX2P48431 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.03□□□□□ -1.44
SOX2P48431 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX2P48431 AC018645.2-201ENST00000609151 472 ntBASIC6.03□□□□□ -1.44
SOX2P48431 AC243830.3-201ENST00000616810 376 ntBASIC6.03□□□□□ -1.44
SOX2P48431 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX2P48431 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX2P48431 AC073488.7-201ENST00000633785 778 ntBASIC6.03□□□□□ -1.44
SOX2P48431 AL596275.2-208ENST00000641192 594 ntBASIC6.03□□□□□ -1.44
SOX2P48431 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX2P48431 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SOX2P48431 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX2P48431 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX2P48431 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SOX2P48431 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX2P48431 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX2P48431 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SOX2P48431 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SOX2P48431 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SOX2P48431 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX2P48431 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
SOX2P48431 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
SOX2P48431 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
SOX2P48431 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
SOX2P48431 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.02□□□□□ -1.44
SOX2P48431 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SOX2P48431 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX2P48431 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX2P48431 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SOX2P48431 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX2P48431 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms