Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SNORD65C-201ENST00000390962 71 ntBASIC8.39□□□□□ -1.07
VARSP26640 RAN-201ENST00000392367 780 ntTSL 5 BASIC8.39□□□□□ -1.07
VARSP26640 EGFLAM-205ENST00000397210 1299 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 AL079342.2-201ENST00000403367 482 ntBASIC8.39□□□□□ -1.07
VARSP26640 AC012462.3-201ENST00000412951 131 ntTSL 3 BASIC8.39□□□□□ -1.07
VARSP26640 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC8.39□□□□□ -1.07
VARSP26640 RPS7P12-201ENST00000422385 582 ntBASIC8.39□□□□□ -1.07
VARSP26640 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC8.39□□□□□ -1.07
VARSP26640 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC8.39□□□□□ -1.07
VARSP26640 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC8.39□□□□□ -1.07
VARSP26640 AC093655.1-201ENST00000446187 641 ntTSL 5 BASIC8.39□□□□□ -1.07
VARSP26640 COX6CP12-201ENST00000446748 202 ntBASIC8.39□□□□□ -1.07
VARSP26640 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC8.39□□□□□ -1.07
VARSP26640 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC8.39□□□□□ -1.07
VARSP26640 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC8.39□□□□□ -1.07
VARSP26640 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC8.39□□□□□ -1.07
VARSP26640 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC8.39□□□□□ -1.07
VARSP26640 AL354872.1-201ENST00000456361 967 ntBASIC8.39□□□□□ -1.07
VARSP26640 PPIAP28-201ENST00000458378 485 ntBASIC8.39□□□□□ -1.07
VARSP26640 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.39□□□□□ -1.07
VARSP26640 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC8.39□□□□□ -1.07
VARSP26640 AC025459.1-201ENST00000504072 156 ntBASIC8.39□□□□□ -1.07
VARSP26640 AC010587.2-201ENST00000511727 448 ntBASIC8.39□□□□□ -1.07
VARSP26640 RNU6ATAC39P-201ENST00000516309 149 ntBASIC8.39□□□□□ -1.07
VARSP26640 RNU6-943P-201ENST00000516960 98 ntBASIC8.39□□□□□ -1.07
VARSP26640 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC8.39□□□□□ -1.07
VARSP26640 MAL2-205ENST00000521048 575 ntTSL 4 BASIC8.39□□□□□ -1.07
VARSP26640 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC8.39□□□□□ -1.07
VARSP26640 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC8.39□□□□□ -1.07
VARSP26640 ZNF123P-201ENST00000531501 1196 ntBASIC8.39□□□□□ -1.07
VARSP26640 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC8.39□□□□□ -1.07
VARSP26640 AC006065.2-201ENST00000536978 211 ntBASIC8.39□□□□□ -1.07
VARSP26640 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC8.39□□□□□ -1.07
VARSP26640 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC8.39□□□□□ -1.07
VARSP26640 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC8.39□□□□□ -1.07
VARSP26640 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC8.39□□□□□ -1.07
VARSP26640 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC8.39□□□□□ -1.07
VARSP26640 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC8.39□□□□□ -1.07
VARSP26640 AC091147.1-201ENST00000583290 510 ntBASIC8.39□□□□□ -1.07
VARSP26640 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC8.39□□□□□ -1.07
VARSP26640 AC003098.1-201ENST00000591540 494 ntTSL 3 BASIC8.39□□□□□ -1.07
VARSP26640 HMGN2P46-208ENST00000598619 490 ntBASIC8.39□□□□□ -1.07
VARSP26640 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC8.39□□□□□ -1.07
VARSP26640 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC8.39□□□□□ -1.07
VARSP26640 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC8.39□□□□□ -1.07
VARSP26640 RN7SL796P-201ENST00000613991 291 ntBASIC8.39□□□□□ -1.07
VARSP26640 AL353726.1-201ENST00000614041 1000 ntBASIC8.39□□□□□ -1.07
VARSP26640 AC026468.1-201ENST00000614981 107 ntBASIC8.39□□□□□ -1.07
VARSP26640 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC8.39□□□□□ -1.07
VARSP26640 MIR6754-201ENST00000621121 66 ntBASIC8.39□□□□□ -1.07
VARSP26640 CU638689.2-201ENST00000623809 818 ntBASIC8.39□□□□□ -1.07
VARSP26640 ADD3-AS1-203ENST00000625954 472 ntTSL 3 BASIC8.39□□□□□ -1.07
VARSP26640 LINC01616-201ENST00000561816 2280 ntBASIC8.39□□□□□ -1.07
VARSP26640 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 AC016831.3-201ENST00000446451 1723 ntBASIC8.39□□□□□ -1.07
VARSP26640 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC8.39□□□□□ -1.07
VARSP26640 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC8.39□□□□□ -1.07
VARSP26640 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
VARSP26640 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
VARSP26640 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
VARSP26640 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARSP26640 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.39□□□□□ -1.07
VARSP26640 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
VARSP26640 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.38□□□□□ -1.07
VARSP26640 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VARSP26640 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARSP26640 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARSP26640 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VARSP26640 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC8.38□□□□□ -1.07
VARSP26640 IL24-202ENST00000367093 1819 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VARSP26640 AC087392.3-202ENST00000358446 1754 ntBASIC8.38□□□□□ -1.07
VARSP26640 OR51E1-202ENST00000530215 2942 ntBASIC8.38□□□□□ -1.07
VARSP26640 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARSP26640 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.38□□□□□ -1.07
VARSP26640 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.38□□□□□ -1.07
VARSP26640 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC8.38□□□□□ -1.07
VARSP26640 MRRFP1-201ENST00000435941 1675 ntBASIC8.38□□□□□ -1.07
VARSP26640 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
VARSP26640 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARSP26640 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC8.38□□□□□ -1.07
VARSP26640 ENSA-209ENST00000369016 923 ntTSL 5 BASIC8.38□□□□□ -1.07
VARSP26640 CST9LP1-201ENST00000376987 444 ntBASIC8.38□□□□□ -1.07
VARSP26640 RNU5A-6P-201ENST00000384136 116 ntBASIC8.38□□□□□ -1.07
VARSP26640 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
VARSP26640 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
VARSP26640 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
VARSP26640 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
VARSP26640 FAT1P1-201ENST00000406588 507 ntBASIC8.38□□□□□ -1.07
VARSP26640 OR13D3P-201ENST00000412501 937 ntBASIC8.38□□□□□ -1.07
VARSP26640 HMGN1P34-201ENST00000413023 290 ntBASIC8.38□□□□□ -1.07
VARSP26640 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC8.38□□□□□ -1.07
VARSP26640 RPL7L1P12-201ENST00000417594 729 ntBASIC8.38□□□□□ -1.07
VARSP26640 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
VARSP26640 OFD1P2Y-201ENST00000421895 1149 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms