Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC073065.1-201ENST00000411678 2866 ntBASIC7.74□□□□□ -1.17
COL4A5P29400 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.74□□□□□ -1.17
COL4A5P29400 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL4A5P29400 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL4A5P29400 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
COL4A5P29400 MTCO1P25-201ENST00000414449 1799 ntBASIC7.74□□□□□ -1.17
COL4A5P29400 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.74□□□□□ -1.17
COL4A5P29400 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL4A5P29400 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL4A5P29400 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL4A5P29400 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL4A5P29400 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL4A5P29400 AC244452.1-201ENST00000413798 141 ntBASIC7.74□□□□□ -1.17
COL4A5P29400 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.74□□□□□ -1.17
COL4A5P29400 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL4A5P29400 SUMO2P3-201ENST00000438311 288 ntBASIC7.74□□□□□ -1.17
COL4A5P29400 RN7SL629P-201ENST00000489622 285 ntBASIC7.74□□□□□ -1.17
COL4A5P29400 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.74□□□□□ -1.17
COL4A5P29400 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.74□□□□□ -1.17
COL4A5P29400 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL4A5P29400 AC016180.1-201ENST00000567945 403 ntBASIC7.74□□□□□ -1.17
COL4A5P29400 AC092121.1-201ENST00000569452 202 ntBASIC7.74□□□□□ -1.17
COL4A5P29400 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.74□□□□□ -1.17
COL4A5P29400 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.74□□□□□ -1.17
COL4A5P29400 SNORD95-201ENST00000579879 68 ntBASIC7.74□□□□□ -1.17
COL4A5P29400 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.74□□□□□ -1.17
COL4A5P29400 AL513218.1-201ENST00000606527 391 ntBASIC7.74□□□□□ -1.17
COL4A5P29400 MIR6826-201ENST00000617808 98 ntBASIC7.74□□□□□ -1.17
COL4A5P29400 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL4A5P29400 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL4A5P29400 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL4A5P29400 CYP2G2P-201ENST00000594920 1485 ntBASIC7.74□□□□□ -1.17
COL4A5P29400 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL4A5P29400 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
COL4A5P29400 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
COL4A5P29400 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
COL4A5P29400 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
COL4A5P29400 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
COL4A5P29400 AL391361.1-201ENST00000405580 489 ntBASIC7.73□□□□□ -1.17
COL4A5P29400 AL049697.3-201ENST00000406493 982 ntBASIC7.73□□□□□ -1.17
COL4A5P29400 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.73□□□□□ -1.17
COL4A5P29400 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.73□□□□□ -1.17
COL4A5P29400 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
COL4A5P29400 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.73□□□□□ -1.17
COL4A5P29400 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
COL4A5P29400 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.73□□□□□ -1.17
COL4A5P29400 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.73□□□□□ -1.17
COL4A5P29400 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.73□□□□□ -1.17
COL4A5P29400 AC004477.3-201ENST00000614061 590 ntBASIC7.73□□□□□ -1.17
COL4A5P29400 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.73□□□□□ -1.17
COL4A5P29400 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL4A5P29400 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.73□□□□□ -1.17
COL4A5P29400 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
COL4A5P29400 OR8B9P-202ENST00000642028 5216 ntBASIC7.73□□□□□ -1.17
COL4A5P29400 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
COL4A5P29400 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
COL4A5P29400 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC7.73□□□□□ -1.17
COL4A5P29400 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL4A5P29400 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL4A5P29400 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.73□□□□□ -1.17
COL4A5P29400 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
COL4A5P29400 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL4A5P29400 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
COL4A5P29400 CR788268.1-201ENST00000603931 1809 ntBASIC7.73□□□□□ -1.17
COL4A5P29400 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.73□□□□□ -1.17
COL4A5P29400 MIR323A-201ENST00000362199 86 ntBASIC7.73□□□□□ -1.17
COL4A5P29400 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.73□□□□□ -1.17
COL4A5P29400 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.73□□□□□ -1.17
COL4A5P29400 AC005332.4-201ENST00000592752 579 ntBASIC7.73□□□□□ -1.17
COL4A5P29400 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.73□□□□□ -1.17
COL4A5P29400 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.73□□□□□ -1.17
COL4A5P29400 MIR6809-201ENST00000612189 116 ntBASIC7.73□□□□□ -1.17
COL4A5P29400 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.73□□□□□ -1.17
COL4A5P29400 SHQ1P1-201ENST00000437111 1544 ntBASIC7.73□□□□□ -1.17
COL4A5P29400 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.73□□□□□ -1.17
COL4A5P29400 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
COL4A5P29400 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
COL4A5P29400 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
COL4A5P29400 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
COL4A5P29400 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC7.72□□□□□ -1.17
COL4A5P29400 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 SNORA58B-201ENST00000364259 136 ntBASIC7.72□□□□□ -1.17
COL4A5P29400 RN7SKP286-201ENST00000410894 299 ntBASIC7.72□□□□□ -1.17
COL4A5P29400 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.72□□□□□ -1.17
COL4A5P29400 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.72□□□□□ -1.17
COL4A5P29400 AC130360.1-201ENST00000425489 1117 ntBASIC7.72□□□□□ -1.17
COL4A5P29400 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms