Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TPM3P06753 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TPM3P06753 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
TPM3P06753 SNORA38B-201ENST00000363524 131 ntBASIC7.45□□□□□ -1.22
TPM3P06753 CYCSP17-201ENST00000407870 315 ntBASIC7.45□□□□□ -1.22
TPM3P06753 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.45□□□□□ -1.22
TPM3P06753 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.45□□□□□ -1.22
TPM3P06753 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.45□□□□□ -1.22
TPM3P06753 RPLP0P1-201ENST00000457002 361 ntBASIC7.45□□□□□ -1.22
TPM3P06753 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TPM3P06753 AC083806.1-201ENST00000468934 316 ntBASIC7.45□□□□□ -1.22
TPM3P06753 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TPM3P06753 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TPM3P06753 AC016559.1-201ENST00000511420 199 ntBASIC7.45□□□□□ -1.22
TPM3P06753 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
TPM3P06753 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.45□□□□□ -1.22
TPM3P06753 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.45□□□□□ -1.22
TPM3P06753 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC7.45□□□□□ -1.22
TPM3P06753 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
TPM3P06753 AC007494.1-201ENST00000562293 760 ntBASIC7.45□□□□□ -1.22
TPM3P06753 AP003115.1-201ENST00000569849 463 ntBASIC7.45□□□□□ -1.22
TPM3P06753 RN7SL270P-201ENST00000579643 281 ntBASIC7.45□□□□□ -1.22
TPM3P06753 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.45□□□□□ -1.22
TPM3P06753 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC7.45□□□□□ -1.22
TPM3P06753 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.45□□□□□ -1.22
TPM3P06753 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.45□□□□□ -1.22
TPM3P06753 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.45□□□□□ -1.22
TPM3P06753 AP000577.1-201ENST00000624366 878 ntBASIC7.45□□□□□ -1.22
TPM3P06753 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
TPM3P06753 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TPM3P06753 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TPM3P06753 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TPM3P06753 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
TPM3P06753 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC7.45□□□□□ -1.22
TPM3P06753 AC093844.1-201ENST00000514910 1361 ntBASIC7.45□□□□□ -1.22
TPM3P06753 AC010624.4-201ENST00000597606 1351 ntBASIC7.45□□□□□ -1.22
TPM3P06753 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
TPM3P06753 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
TPM3P06753 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
TPM3P06753 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
TPM3P06753 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TPM3P06753 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
TPM3P06753 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
TPM3P06753 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TPM3P06753 LINC01616-201ENST00000561816 2280 ntBASIC7.44□□□□□ -1.22
TPM3P06753 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.44□□□□□ -1.22
TPM3P06753 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TPM3P06753 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TPM3P06753 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TPM3P06753 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TPM3P06753 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.44□□□□□ -1.22
TPM3P06753 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TPM3P06753 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
TPM3P06753 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.44□□□□□ -1.22
TPM3P06753 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.44□□□□□ -1.22
TPM3P06753 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC7.44□□□□□ -1.22
TPM3P06753 RPS26P38-201ENST00000414476 348 ntBASIC7.44□□□□□ -1.22
TPM3P06753 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC7.44□□□□□ -1.22
TPM3P06753 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC7.44□□□□□ -1.22
TPM3P06753 FDPSP6-201ENST00000425091 512 ntBASIC7.44□□□□□ -1.22
TPM3P06753 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.44□□□□□ -1.22
TPM3P06753 AC239367.3-201ENST00000428996 814 ntBASIC7.44□□□□□ -1.22
TPM3P06753 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.44□□□□□ -1.22
TPM3P06753 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.44□□□□□ -1.22
TPM3P06753 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC7.44□□□□□ -1.22
TPM3P06753 AC090954.1-201ENST00000445502 361 ntBASIC7.44□□□□□ -1.22
TPM3P06753 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.44□□□□□ -1.22
TPM3P06753 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC7.44□□□□□ -1.22
TPM3P06753 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.44□□□□□ -1.22
TPM3P06753 RN7SL228P-201ENST00000470060 303 ntBASIC7.44□□□□□ -1.22
TPM3P06753 NACAP6-201ENST00000509572 622 ntBASIC7.44□□□□□ -1.22
TPM3P06753 AC100854.1-201ENST00000520351 341 ntBASIC7.44□□□□□ -1.22
TPM3P06753 AP003084.1-201ENST00000524828 742 ntBASIC7.44□□□□□ -1.22
TPM3P06753 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.44□□□□□ -1.22
TPM3P06753 OR7E161P-201ENST00000533722 967 ntBASIC7.44□□□□□ -1.22
TPM3P06753 AL049869.4-201ENST00000555669 178 ntBASIC7.44□□□□□ -1.22
TPM3P06753 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.44□□□□□ -1.22
TPM3P06753 AP001120.4-201ENST00000590231 108 ntBASIC7.44□□□□□ -1.22
TPM3P06753 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.44□□□□□ -1.22
TPM3P06753 AC113361.1-201ENST00000606683 543 ntBASIC7.44□□□□□ -1.22
TPM3P06753 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.44□□□□□ -1.22
TPM3P06753 AC004241.2-201ENST00000614562 444 ntBASIC7.44□□□□□ -1.22
TPM3P06753 AC243830.3-201ENST00000616810 376 ntBASIC7.44□□□□□ -1.22
TPM3P06753 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.44□□□□□ -1.22
TPM3P06753 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TPM3P06753 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC7.44□□□□□ -1.22
TPM3P06753 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.44□□□□□ -1.22
TPM3P06753 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.44□□□□□ -1.22
TPM3P06753 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
TPM3P06753 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.43□□□□□ -1.22
TPM3P06753 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TPM3P06753 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
TPM3P06753 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TPM3P06753 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.43□□□□□ -1.22
TPM3P06753 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
TPM3P06753 RNU1-46P-201ENST00000384425 164 ntBASIC7.43□□□□□ -1.22
TPM3P06753 PCNAP3-201ENST00000397222 778 ntBASIC7.43□□□□□ -1.22
TPM3P06753 OR7E91P-201ENST00000400027 866 ntBASIC7.43□□□□□ -1.22
TPM3P06753 AL049697.3-201ENST00000406493 982 ntBASIC7.43□□□□□ -1.22
TPM3P06753 RN7SKP161-201ENST00000411110 305 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms