Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.24□□□□□ -1.57
RBFOX3A6NFN3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 SHQ1P1-201ENST00000437111 1544 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AC018628.1-201ENST00000624147 3819 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AL049634.1-201ENST00000453770 1720 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 HMGB3P1-201ENST00000393368 573 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 MSRB1P1-201ENST00000396851 354 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AL023284.3-201ENST00000407767 334 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 RN7SKP85-201ENST00000411349 318 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 GAPDHP55-201ENST00000423136 803 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 OR5W1P-201ENST00000423705 938 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 GYG1P2-201ENST00000426437 1006 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 RPL23AP68-201ENST00000480924 445 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 NMNAT1P4-201ENST00000505598 840 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AC008417.1-201ENST00000510014 565 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 SCARNA6-201ENST00000515982 265 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AP006437.1-202ENST00000530327 933 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AC079866.1-201ENST00000534985 1220 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AP000619.1-201ENST00000540293 1000 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 NXPE2P1-201ENST00000543705 726 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AC023310.2-201ENST00000553844 547 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AC010719.1-201ENST00000602992 747 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AC006335.3-201ENST00000613408 292 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 HOTTIP_2.1-201ENST00000616633 376 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AC139426.3-201ENST00000605648 2059 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 DDX50P1-201ENST00000438163 2400 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 MFSD8-256ENST00000641949 1640 ntBASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RBFOX3A6NFN3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 XKRY2-202ENST00000623874 1581 ntBASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 XKRY-202ENST00000624960 1581 ntBASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 EEF1A1P20-201ENST00000514852 1386 ntBASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 NHP2P2-201ENST00000396362 460 ntBASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 AL121835.1-201ENST00000404250 354 ntBASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 AC231533.2-201ENST00000419045 978 ntBASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 HCG25-217ENST00000422366 702 ntTSL 3 BASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 AC245047.6-201ENST00000445444 617 ntBASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 OR7E62P-201ENST00000456741 477 ntBASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 RN7SL849P-201ENST00000485236 295 ntBASIC5.22□□□□□ -1.57
RBFOX3A6NFN3 RN7SL519P-201ENST00000497925 288 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms