Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC117395.1-201ENST00000487390 403 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 RN7SKP242-201ENST00000515967 289 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 RN7SKP11-201ENST00000517018 287 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 SSU72P6-201ENST00000532644 488 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC011611.6-201ENST00000547483 255 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 NF1P12-201ENST00000549593 583 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC026458.1-201ENST00000564330 438 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC011447.2-201ENST00000592921 283 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 OR7A11P-201ENST00000597719 953 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AL359704.2-201ENST00000604335 521 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AL035410.2-201ENST00000604963 864 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC012629.3-201ENST00000623397 328 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC073263.3-201ENST00000624449 858 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 NCOA4P2-201ENST00000340589 1813 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC013488.1-201ENST00000526618 1838 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC005618.1-201ENST00000606901 3148 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AL139384.2-201ENST00000613809 3590 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AL162456.1-201ENST00000634535 2006 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 CRYGGP-201ENST00000443337 145 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 SRP68P2-201ENST00000456184 254 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 CBX5P1-201ENST00000468470 561 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 RN7SL518P-201ENST00000491887 280 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AL135933.1-201ENST00000498657 802 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AC010409.2-201ENST00000505780 478 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 DCAF13P2-201ENST00000514188 555 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AC107952.1-201ENST00000524200 376 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 MRPL45P2-203ENST00000573318 473 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 MIR4301-201ENST00000577203 66 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AC007255.2-201ENST00000604053 631 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AL354718.1-201ENST00000619764 589 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AC008626.2-201ENST00000624425 248 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AL359263.1-201ENST00000441188 2796 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AC093829.1-201ENST00000506662 1618 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AC007485.2-201ENST00000623493 1667 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AC110373.1-201ENST00000505994 3505 ntBASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RHBDD3Q9Y3P4 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms