Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.21□□□□□ -1.26
NXF3Q9H4D5 AL020997.1-201ENST00000446554 349 ntBASIC7.21□□□□□ -1.26
NXF3Q9H4D5 AC002486.2-201ENST00000447806 590 ntBASIC7.21□□□□□ -1.26
NXF3Q9H4D5 RN7SL834P-201ENST00000461450 286 ntBASIC7.21□□□□□ -1.26
NXF3Q9H4D5 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC7.21□□□□□ -1.26
NXF3Q9H4D5 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.21□□□□□ -1.26
NXF3Q9H4D5 AC024405.1-201ENST00000532521 1042 ntBASIC7.21□□□□□ -1.26
NXF3Q9H4D5 AC121758.1-202ENST00000556917 658 ntBASIC7.21□□□□□ -1.26
NXF3Q9H4D5 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.21□□□□□ -1.26
NXF3Q9H4D5 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.21□□□□□ -1.26
NXF3Q9H4D5 AL589765.6-201ENST00000601909 549 ntBASIC7.21□□□□□ -1.26
NXF3Q9H4D5 AL359091.2-201ENST00000609303 556 ntBASIC7.21□□□□□ -1.26
NXF3Q9H4D5 MIR7854-201ENST00000620068 65 ntBASIC7.21□□□□□ -1.26
NXF3Q9H4D5 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.21□□□□□ -1.26
NXF3Q9H4D5 AC120057.5-201ENST00000623840 154 ntBASIC7.21□□□□□ -1.26
NXF3Q9H4D5 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
NXF3Q9H4D5 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
NXF3Q9H4D5 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
NXF3Q9H4D5 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
NXF3Q9H4D5 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NXF3Q9H4D5 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NXF3Q9H4D5 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.21□□□□□ -1.26
NXF3Q9H4D5 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 RNU1-84P-201ENST00000365447 164 ntBASIC7.2□□□□□ -1.26
NXF3Q9H4D5 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AC068138.1-201ENST00000412635 217 ntBASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AL929472.1-201ENST00000417484 429 ntBASIC7.2□□□□□ -1.26
NXF3Q9H4D5 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AC097359.1-201ENST00000447946 463 ntBASIC7.2□□□□□ -1.26
NXF3Q9H4D5 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AC124891.1-201ENST00000536322 519 ntBASIC7.2□□□□□ -1.26
NXF3Q9H4D5 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AC023310.2-201ENST00000553844 547 ntBASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AP003115.1-201ENST00000569849 463 ntBASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AC133552.4-201ENST00000576103 676 ntBASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AC011891.2-201ENST00000604949 397 ntBASIC7.2□□□□□ -1.26
NXF3Q9H4D5 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NXF3Q9H4D5 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 BX322650.1-201ENST00000332359 2143 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 NBPF8-201ENST00000583271 5330 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 GPN3P1-201ENST00000423883 535 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 RARRES2P3-201ENST00000457739 473 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 SULT1D1P-201ENST00000458020 882 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms