Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6□□□□□ -1.45
RFT1Q96AA3 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6□□□□□ -1.45
RFT1Q96AA3 RPL5P16-201ENST00000471467 790 ntBASIC6□□□□□ -1.45
RFT1Q96AA3 RN7SL182P-201ENST00000496499 300 ntBASIC6□□□□□ -1.45
RFT1Q96AA3 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6□□□□□ -1.45
RFT1Q96AA3 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6□□□□□ -1.45
RFT1Q96AA3 HMGN2P47-201ENST00000559378 272 ntBASIC6□□□□□ -1.45
RFT1Q96AA3 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
RFT1Q96AA3 EEF1B2P1-201ENST00000567221 672 ntBASIC6□□□□□ -1.45
RFT1Q96AA3 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6□□□□□ -1.45
RFT1Q96AA3 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
RFT1Q96AA3 AC122710.3-201ENST00000606566 541 ntBASIC6□□□□□ -1.45
RFT1Q96AA3 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6□□□□□ -1.45
RFT1Q96AA3 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6□□□□□ -1.45
RFT1Q96AA3 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6□□□□□ -1.45
RFT1Q96AA3 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6□□□□□ -1.45
RFT1Q96AA3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFT1Q96AA3 EEF1A1P20-201ENST00000514852 1386 ntBASIC6□□□□□ -1.45
RFT1Q96AA3 AC011504.1-201ENST00000623331 4103 ntBASIC6□□□□□ -1.45
RFT1Q96AA3 AL078595.2-201ENST00000605309 1780 ntBASIC6□□□□□ -1.45
RFT1Q96AA3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RFT1Q96AA3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFT1Q96AA3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFT1Q96AA3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
RFT1Q96AA3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFT1Q96AA3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
RFT1Q96AA3 AL137058.3-201ENST00000624531 3099 ntBASIC6□□□□□ -1.45
RFT1Q96AA3 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 MAPK10-379ENST00000642013 1385 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 FAM32BP-201ENST00000344033 333 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 RN7SKP186-201ENST00000365371 303 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 SNORA70.9-201ENST00000384370 135 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 OR2W4P-201ENST00000406496 926 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 ST13P2-201ENST00000438916 1109 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 SNX18P9-201ENST00000440580 835 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 AC009237.4-201ENST00000441078 238 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 AP000805.1-201ENST00000471604 784 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 AC079594.1-201ENST00000489757 331 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 RN7SL306P-201ENST00000492941 296 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 SNORA58-201ENST00000505219 137 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 AL135978.1-201ENST00000553618 1266 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 AL109628.1-201ENST00000556877 366 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 AL592504.1-201ENST00000605319 439 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 AL136139.1-201ENST00000605568 222 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 AC091768.1-201ENST00000609258 930 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 AC021422.1-201ENST00000621212 473 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 AC012254.5-201ENST00000623573 478 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 AL049541.2-201ENST00000626377 555 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 OR7E161P-202ENST00000641994 1033 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 AC093278.2-201ENST00000564956 2485 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 PWRN1-212ENST00000569908 1435 ntBASIC5.99□□□□□ -1.45
RFT1Q96AA3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RFT1Q96AA3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.99□□□□□ -1.45
RFT1Q96AA3 AC026523.2-201ENST00000625039 7739 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 AL132656.3-201ENST00000606384 1595 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms