Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AP001858.2-201ENST00000536213 601 ntBASIC11.53□□□□□ -0.56
SMARCA4P51532 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC11.53□□□□□ -0.56
SMARCA4P51532 RPA2P1-201ENST00000556557 721 ntBASIC11.53□□□□□ -0.56
SMARCA4P51532 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC11.53□□□□□ -0.56
SMARCA4P51532 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC11.53□□□□□ -0.56
SMARCA4P51532 RFPL4AP6-201ENST00000616792 846 ntBASIC11.53□□□□□ -0.56
SMARCA4P51532 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC11.53□□□□□ -0.56
SMARCA4P51532 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMARCA4P51532 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMARCA4P51532 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMARCA4P51532 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMARCA4P51532 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMARCA4P51532 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMARCA4P51532 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMARCA4P51532 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMARCA4P51532 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SMARCA4P51532 RYR1-201ENST00000355481 15377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SMARCA4P51532 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC11.53□□□□□ -0.56
SMARCA4P51532 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
SMARCA4P51532 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC11.53□□□□□ -0.56
SMARCA4P51532 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC11.53□□□□□ -0.56
SMARCA4P51532 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC11.53□□□□□ -0.56
SMARCA4P51532 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC11.53□□□□□ -0.56
SMARCA4P51532 AC010327.2-201ENST00000587647 488 ntBASIC11.53□□□□□ -0.56
SMARCA4P51532 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC11.53□□□□□ -0.56
SMARCA4P51532 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC11.53□□□□□ -0.56
SMARCA4P51532 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC11.53□□□□□ -0.56
SMARCA4P51532 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SMARCA4P51532 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SMARCA4P51532 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC11.52□□□□□ -0.56
SMARCA4P51532 ECD-205ENST00000454759 2084 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SMARCA4P51532 BTK-209ENST00000618050 2417 ntTSL 5 BASIC11.52□□□□□ -0.56
SMARCA4P51532 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 SPATA31C2-201ENST00000324915 3777 ntBASIC11.52□□□□□ -0.57
SMARCA4P51532 TNC-210ENST00000535648 7508 ntTSL 5 BASIC11.52□□□□□ -0.57
SMARCA4P51532 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
SMARCA4P51532 BX284632.2-201ENST00000421091 399 ntBASIC11.52□□□□□ -0.57
SMARCA4P51532 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 AL157884.1-201ENST00000424561 454 ntBASIC11.52□□□□□ -0.57
SMARCA4P51532 AL512605.1-202ENST00000441919 381 ntBASIC11.52□□□□□ -0.57
SMARCA4P51532 AL355355.1-201ENST00000442900 793 ntBASIC11.52□□□□□ -0.57
SMARCA4P51532 AL359955.2-201ENST00000445380 353 ntBASIC11.52□□□□□ -0.57
SMARCA4P51532 AC005077.1-201ENST00000449226 375 ntBASIC11.52□□□□□ -0.57
SMARCA4P51532 HIGD1AP16-201ENST00000450986 258 ntBASIC11.52□□□□□ -0.57
SMARCA4P51532 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SMARCA4P51532 RN7SL629P-201ENST00000489622 285 ntBASIC11.52□□□□□ -0.57
SMARCA4P51532 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC11.52□□□□□ -0.57
SMARCA4P51532 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 MIR4489-201ENST00000578869 62 ntBASIC11.52□□□□□ -0.57
SMARCA4P51532 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC11.52□□□□□ -0.57
SMARCA4P51532 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC11.52□□□□□ -0.57
SMARCA4P51532 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
SMARCA4P51532 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC11.52□□□□□ -0.57
SMARCA4P51532 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMARCA4P51532 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SMARCA4P51532 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMARCA4P51532 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMARCA4P51532 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC11.51□□□□□ -0.57
SMARCA4P51532 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
SMARCA4P51532 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMARCA4P51532 MIR1203-201ENST00000408812 85 ntBASIC11.51□□□□□ -0.57
SMARCA4P51532 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC11.51□□□□□ -0.57
SMARCA4P51532 RPL5P11-201ENST00000498068 893 ntBASIC11.51□□□□□ -0.57
SMARCA4P51532 AC010547.6-201ENST00000571789 193 ntBASIC11.51□□□□□ -0.57
SMARCA4P51532 OR1N1-202ENST00000619659 939 ntBASIC11.51□□□□□ -0.57
SMARCA4P51532 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SMARCA4P51532 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMARCA4P51532 AC130360.2-201ENST00000533477 1556 ntBASIC11.51□□□□□ -0.57
SMARCA4P51532 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMARCA4P51532 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC11.51□□□□□ -0.57
SMARCA4P51532 NEK2P2-201ENST00000438441 1338 ntBASIC11.51□□□□□ -0.57
SMARCA4P51532 CTH-203ENST00000411986 2044 ntTSL 2 BASIC11.51□□□□□ -0.57
SMARCA4P51532 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC11.51□□□□□ -0.57
SMARCA4P51532 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMARCA4P51532 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMARCA4P51532 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC11.5□□□□□ -0.57
SMARCA4P51532 UGT2B25P-201ENST00000511504 1586 ntBASIC11.5□□□□□ -0.57
SMARCA4P51532 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMARCA4P51532 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMARCA4P51532 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC11.5□□□□□ -0.57
SMARCA4P51532 BX119917.1-201ENST00000432517 502 ntBASIC11.5□□□□□ -0.57
SMARCA4P51532 HNRNPA1P18-201ENST00000433537 927 ntBASIC11.5□□□□□ -0.57
SMARCA4P51532 AL353662.1-201ENST00000439099 327 ntBASIC11.5□□□□□ -0.57
SMARCA4P51532 DEFA11P-201ENST00000446470 261 ntBASIC11.5□□□□□ -0.57
SMARCA4P51532 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC11.5□□□□□ -0.57
SMARCA4P51532 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC11.5□□□□□ -0.57
SMARCA4P51532 RN7SL326P-201ENST00000477493 296 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms