Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 IGKV1D-32-201ENST00000517449 318 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC107952.1-201ENST00000524200 376 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 SSU72P6-201ENST00000532644 488 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC091304.5-201ENST00000568969 158 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SL689P-201ENST00000577215 297 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC018659.2-201ENST00000624690 715 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC140479.4-205ENST00000636339 820 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 MAPK10-379ENST00000642013 1385 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC067942.1-201ENST00000488045 1493 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 ATP5BP1-201ENST00000411980 1574 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AL359694.2-201ENST00000567753 1615 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AC105114.1-201ENST00000624795 1862 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 PPIAP26-201ENST00000377951 522 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 RNU1-56P-201ENST00000391303 164 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SKP268-201ENST00000411107 316 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 RPSAP60-201ENST00000415403 880 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 ELOBP4-201ENST00000423418 296 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AC245884.2-201ENST00000426257 404 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AC018804.1-201ENST00000430381 618 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 PUDPP2-201ENST00000431423 643 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AL451136.1-201ENST00000435399 325 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AC079193.1-201ENST00000460497 588 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 RPS26P11-201ENST00000463445 348 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SL149P-201ENST00000465197 281 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 RPS26P6-201ENST00000475156 348 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 LECT2-203ENST00000512872 762 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AP006587.5-201ENST00000532033 739 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 OR4A6P-201ENST00000534364 970 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AL591767.3-201ENST00000554632 525 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SL199P-201ENST00000578752 281 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SL656P-201ENST00000579044 281 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SL404P-201ENST00000582421 281 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 FXYD6P1-201ENST00000604857 285 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AC131009.3-201ENST00000621809 287 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AC093909.6-201ENST00000624757 775 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms