Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LINC01560-201ENST00000357412 1253 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 RNA5SP478-201ENST00000364657 115 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 CLRN3-201ENST00000368671 1152 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 SSX6-201ENST00000376932 562 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 MAS1L-201ENST00000377127 1260 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 SNORA70.6-201ENST00000383934 134 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 TRBV7-5-201ENST00000390382 345 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC087752.1-201ENST00000391360 558 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 PHBP1-201ENST00000392260 808 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 SNORD88A-201ENST00000408314 91 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SKP247-201ENST00000411094 308 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 UBE2V1P14-201ENST00000415815 558 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 PRDX3P1-201ENST00000418695 763 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC003071.2-201ENST00000423857 315 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 RPL10P5-201ENST00000427719 639 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC009365.1-201ENST00000436379 751 ntTSL 2 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AP000350.3-201ENST00000440099 289 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 ACTP1-201ENST00000440793 383 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 OGFRP1-203ENST00000446578 551 ntTSL 4 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC073909.1-201ENST00000447112 999 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC022494.1-201ENST00000466044 728 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SL392P-201ENST00000473024 299 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC091544.1-201ENST00000484702 348 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC114400.1-201ENST00000487624 681 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 HMGB1P19-201ENST00000517578 577 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 IGHV7-56-201ENST00000518372 351 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC087752.3-201ENST00000523905 709 ntTSL 2 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 CD3E-204ENST00000528600 1289 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 OR6M3P-201ENST00000531567 700 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 WFDC21P-207ENST00000590346 630 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AL035417.2-201ENST00000603887 796 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 PRYP3-202ENST00000607210 444 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AL451049.1-201ENST00000608672 497 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AL355994.5-201ENST00000613591 236 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AC127071.1-201ENST00000624997 712 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 OR7E91P-202ENST00000642062 1198 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF300P1-201ENST00000356555 1822 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AL022322.2-201ENST00000624072 20397 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 CASC20-201ENST00000415932 1484 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 AC073136.1-201ENST00000449426 2884 ntBASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 PBLD-207ENST00000495025 1349 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 FGG-204ENST00000405164 1539 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 VEZF1P1-201ENST00000423931 1541 ntBASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 RPL21-201ENST00000272274 616 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 NR1I3-206ENST00000367984 1059 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 TRAV8-6-201ENST00000390443 561 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 PMS2P5-201ENST00000398065 516 ntBASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 RPL5P35-201ENST00000398869 816 ntBASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 RPL31-202ENST00000409000 641 ntTSL 2 BASIC3.26□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SKP89-201ENST00000410774 242 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms