Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 OR2A3P-202ENST00000641249 1776 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AL080312.1-201ENST00000256654 824 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 OR2M1P-201ENST00000318104 951 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 RN7SKP77-201ENST00000363261 353 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 RPSAP60-201ENST00000415403 880 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AL359633.1-201ENST00000421403 310 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 GRPEL2P2-201ENST00000421856 670 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 GAPDHP69-201ENST00000425504 1008 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 LAPTM4BP1-201ENST00000447781 690 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 MED28P7-201ENST00000456611 530 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 RN7SL379P-201ENST00000479912 293 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 RN7SL776P-201ENST00000493390 268 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AC087752.2-201ENST00000521219 281 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AC091768.1-201ENST00000609258 930 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 MIR6737-201ENST00000617385 70 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 MIR6829-201ENST00000620375 67 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 TUBBP10-201ENST00000427668 1301 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 AC022034.1-201ENST00000512867 2156 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 HSP90AA2P-201ENST00000530115 2196 ntBASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 RNU12-2P-201ENST00000364789 156 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 RNA5SP280-201ENST00000411230 115 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 RN7SKP30-201ENST00000411373 334 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 SNX19-202ENST00000426933 888 ntTSL 2 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC007365.2-201ENST00000428806 458 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 OR52U1P-201ENST00000439752 923 ntBASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.92□□□□□ -1.46
RHBDD3Q9Y3P4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms