Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 AL663061.1-201ENST00000416625 580 ntBASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 CYCSP52-201ENST00000422857 310 ntBASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 PARP4P1-201ENST00000435945 2337 ntBASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 EIF3LP2-201ENST00000457262 807 ntBASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 MARK2P4-201ENST00000503381 2380 ntBASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 AP002370.1-201ENST00000528055 1602 ntBASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 AC027667.1-201ENST00000545814 304 ntBASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 MIR378H-201ENST00000579966 83 ntBASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 AC245052.7-201ENST00000601161 359 ntBASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 AC068733.2-201ENST00000605434 1418 ntBASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 CASC19-228ENST00000641414 1684 ntBASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RSPO3Q9BXY4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC095038.1-201ENST00000429248 1591 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 Z93929.1-201ENST00000418200 1475 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC067942.1-201ENST00000488045 1493 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 STAG3L4-201ENST00000352103 530 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 RNU1-56P-201ENST00000391303 164 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 RPL12P23-201ENST00000405880 490 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 RN7SKP91-201ENST00000410852 288 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 RN7SKP30-201ENST00000411373 334 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 SETP22-201ENST00000412243 957 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 RPS7P12-201ENST00000422385 582 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 GAPDHP57-201ENST00000424400 585 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 RPS7P4-201ENST00000444127 582 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AL121578.2-201ENST00000448797 447 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 RPS10P28-201ENST00000480396 498 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 RPL7AP30-201ENST00000482859 796 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC025271.1-201ENST00000485045 429 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC022415.1-202ENST00000486612 523 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 IGKV1D-32-201ENST00000517449 318 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC084337.1-201ENST00000524809 686 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC027796.1-201ENST00000575593 512 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC137695.1-201ENST00000604126 489 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC022001.1-201ENST00000605193 268 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC087392.3-202ENST00000358446 1754 ntBASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RSPO3Q9BXY4 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms