Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNA5SP442-201ENST00000365050 107 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AL451142.1-201ENST00000375867 775 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 PPIAP26-201ENST00000377951 522 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AL049697.3-201ENST00000406493 982 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 CYCSP17-201ENST00000407870 315 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AC007568.1-201ENST00000422912 471 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AC239367.3-201ENST00000428996 814 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 RN7SL338P-201ENST00000481467 293 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 HNRNPA1P17-201ENST00000496620 924 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 MRPL49P1-201ENST00000505951 535 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AC083906.1-201ENST00000509298 406 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AP005639.1-201ENST00000526939 192 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 OR5M6P-201ENST00000530227 937 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 UBE2CP4-201ENST00000561405 535 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 RN7SL270P-201ENST00000579643 281 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AC005070.1-201ENST00000603744 365 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AC004241.2-201ENST00000614562 444 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AL132821.1-201ENST00000616029 394 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 AL669830.1-201ENST00000621457 656 ntBASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CCDC71LQ8N9Z2 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC71LQ8N9Z2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC71LQ8N9Z2 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC5.59□□□□□ -1.52
CCDC71LQ8N9Z2 ATP5BP1-201ENST00000411980 1574 ntBASIC5.59□□□□□ -1.52
CCDC71LQ8N9Z2 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC71LQ8N9Z2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.59□□□□□ -1.52
CCDC71LQ8N9Z2 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 U3.1-201ENST00000362500 215 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 SNORD8-201ENST00000363915 110 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 RN7SKP237-201ENST00000364663 301 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 SNORA51.7-201ENST00000384171 134 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 RNU1-46P-201ENST00000384425 164 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 FAUP2-201ENST00000394301 401 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 RPL7-203ENST00000396466 762 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 HNRNPCP2-201ENST00000399515 881 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 EIF4A1P13-201ENST00000415667 230 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC002367.1-201ENST00000416765 405 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 CHCHD3P1-201ENST00000425516 676 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 MYL6P3-201ENST00000436904 432 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 ATP5G1P6-201ENST00000451206 412 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 RPS26P11-201ENST00000463445 348 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC091982.1-202ENST00000473923 343 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 APOPT1-206ENST00000476323 757 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 RN7SL379P-201ENST00000479912 293 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC106774.2-201ENST00000510266 406 ntBASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC71LQ8N9Z2 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms