Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CD209-211ENST00000602261 939 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AP001267.4-201ENST00000602598 545 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC018737.1-201ENST00000603900 204 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC124312.5-201ENST00000604451 268 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AP000894.4-201ENST00000610185 483 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC018926.2-201ENST00000611214 498 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC010538.1-201ENST00000615131 663 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC138305.3-201ENST00000624988 240 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AL355480.4-201ENST00000626823 69 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 LINC01725-205ENST00000457273 1991 ntTSL 2 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 SOCS5P4-201ENST00000454743 1566 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 CD200-203ENST00000473539 1524 ntTSL 2 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC087392.3-202ENST00000358446 1754 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 VPS11-206ENST00000614944 3388 ntTSL 2 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 TTC39DP-201ENST00000416781 1688 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AL590004.4-201ENST00000566733 7060 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AC008537.3-201ENST00000623128 1881 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 RNU4-73P-201ENST00000363164 141 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 RIT1-201ENST00000368322 855 ntTSL 3 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 MT-TS1-201ENST00000387416 69 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 FTH1P3-201ENST00000394290 584 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AL136968.2-201ENST00000407959 354 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 SNORA73.3-201ENST00000410213 189 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 MTND2P23-201ENST00000422990 651 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 CFL1P8-201ENST00000436148 475 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 RPL15P1-201ENST00000439981 600 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AL080317.1-201ENST00000444259 557 ntTSL 2 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 CST12P-201ENST00000457644 362 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AC072039.1-201ENST00000477611 581 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AC006499.5-201ENST00000505037 514 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AC010342.1-201ENST00000514047 877 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 RNU6-358P-201ENST00000516564 75 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 FAM92A1P1-201ENST00000528023 890 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 GSG1-206ENST00000537302 1028 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AL157394.1-201ENST00000562983 1224 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 ANP32BP1-201ENST00000564205 1297 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 APOOP5-202ENST00000564761 566 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AC008752.3-201ENST00000588113 712 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AC060766.2-201ENST00000588235 334 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AL135999.3-201ENST00000610501 812 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AL442067.2-201ENST00000614033 363 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 MIR7844-201ENST00000616161 122 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AC010205.1-201ENST00000616668 449 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 MIR6505-201ENST00000617206 71 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AL157359.3-201ENST00000623771 217 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AC073488.11-201ENST00000633298 754 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AL583852.1-201ENST00000635018 572 ntTSL 4 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 KRT7-214ENST00000638501 398 ntTSL 5 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 SKAP1-201ENST00000336915 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AC096642.1-201ENST00000612055 2614 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 IPO7P2-201ENST00000451446 1750 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 TEX21P-201ENST00000447107 1476 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 AC136428.3-201ENST00000566387 1990 ntBASIC8.88□□□□□ -0.99
SCUBE3Q8IX30 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms