Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 THAP12P3-201ENST00000456373 2266 ntBASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 HSPD1P14-201ENST00000432666 1618 ntBASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
TRIM48Q8IWZ4 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 RNA5SP218-201ENST00000363188 109 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 SNORD116-2-201ENST00000384274 95 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 SNORD116-6-201ENST00000384711 96 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC092646.1-201ENST00000427142 901 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC073900.1-201ENST00000429766 776 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 ZNF965P-201ENST00000432501 817 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AL390879.1-201ENST00000439143 386 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 TXNP2-201ENST00000443918 295 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC093663.2-201ENST00000484625 313 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC073648.3-201ENST00000504939 925 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 RNU5A-7P-201ENST00000515979 116 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 UBE2CP1-201ENST00000557130 554 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 RN7SL14P-201ENST00000579715 298 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AL133247.2-201ENST00000603236 482 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AP001554.1-201ENST00000604533 376 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC004241.3-201ENST00000611728 517 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC211433.3-201ENST00000623770 375 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC116631.1-202ENST00000640984 683 ntBASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM48Q8IWZ4 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM48Q8IWZ4 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM48Q8IWZ4 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
TRIM48Q8IWZ4 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM48Q8IWZ4 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM48Q8IWZ4 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM48Q8IWZ4 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.15□□□□□ -1.27
TRIM48Q8IWZ4 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.15□□□□□ -1.27
TRIM48Q8IWZ4 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 OR51B3P-201ENST00000412287 913 ntBASIC7.14□□□□□ -1.27
TRIM48Q8IWZ4 RPL34P19-201ENST00000415903 342 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms