Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 AL512637.1-201ENST00000439523 1231 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 AL606490.8-201ENST00000441624 319 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 RN7SL808P-201ENST00000496066 299 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 FO393422.1-201ENST00000603908 708 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 OR1N1-202ENST00000619659 939 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 AC112243.1-201ENST00000623949 3851 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 AC015689.2-201ENST00000528172 1738 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 LRAT-201ENST00000336356 4928 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 NDUFS5P5-201ENST00000437256 321 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 EEF1B2P5-201ENST00000444820 548 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 RPS17P15-201ENST00000475609 349 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC112225.1-201ENST00000508230 297 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AL691477.1-201ENST00000624398 162 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC007842.1-201ENST00000597336 2039 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AL590762.1-201ENST00000391782 432 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 GABARAPL3-201ENST00000412799 354 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AL583856.1-201ENST00000454078 1101 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC139272.1-201ENST00000505516 640 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC131392.1-201ENST00000506490 633 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC245014.3-201ENST00000618589 347 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 RN7SKP161-201ENST00000411110 305 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC110775.1-201ENST00000513721 462 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 AL137246.2-201ENST00000613439 662 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 MED23-205ENST00000368068 5233 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS13CQ709C8 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 ZNF160-214ENST00000601421 4688 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS13CQ709C8 ITPRIPL1-201ENST00000361124 4295 ntBASIC5.18□□□□□ -1.58
VPS13CQ709C8 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AL445238.1-204ENST00000400311 463 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 VDAC1P2-201ENST00000423609 850 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms