Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.33□□□□□ -1.24
UBE3AQ05086 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.33□□□□□ -1.24
UBE3AQ05086 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
UBE3AQ05086 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
UBE3AQ05086 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.33□□□□□ -1.24
UBE3AQ05086 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
UBE3AQ05086 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
UBE3AQ05086 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.32□□□□□ -1.24
UBE3AQ05086 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 AP002800.1-201ENST00000624982 2225 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.32□□□□□ -1.24
UBE3AQ05086 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.32□□□□□ -1.24
UBE3AQ05086 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.32□□□□□ -1.24
UBE3AQ05086 TPTE2P2-201ENST00000403471 1466 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.32□□□□□ -1.24
UBE3AQ05086 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 STAG3L4-201ENST00000352103 530 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 RNA5SP140-201ENST00000364524 92 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 RN7SKP15-201ENST00000364742 309 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 RN7SKP269-201ENST00000365545 319 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.32□□□□□ -1.24
UBE3AQ05086 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.32□□□□□ -1.24
UBE3AQ05086 AL390728.3-201ENST00000452704 270 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 RN7SL160P-201ENST00000468558 284 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 RN7SL413P-201ENST00000482700 297 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 RPL12P7-201ENST00000493832 494 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 SNX18P23-201ENST00000510867 677 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.32□□□□□ -1.24
UBE3AQ05086 AC011853.1-201ENST00000518911 454 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.32□□□□□ -1.24
UBE3AQ05086 AC008676.3-201ENST00000521237 435 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.32□□□□□ -1.24
UBE3AQ05086 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.32□□□□□ -1.24
UBE3AQ05086 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.32□□□□□ -1.24
UBE3AQ05086 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC7.32□□□□□ -1.24
UBE3AQ05086 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.32□□□□□ -1.24
UBE3AQ05086 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.32□□□□□ -1.24
UBE3AQ05086 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.32□□□□□ -1.24
UBE3AQ05086 AL078623.1-201ENST00000602702 907 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 AL590032.1-201ENST00000604920 252 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC7.32□□□□□ -1.24
UBE3AQ05086 AC010325.3-201ENST00000641084 394 ntBASIC7.32□□□□□ -1.24
UBE3AQ05086 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
UBE3AQ05086 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.32□□□□□ -1.24
UBE3AQ05086 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.32□□□□□ -1.24
UBE3AQ05086 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.32□□□□□ -1.24
UBE3AQ05086 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
UBE3AQ05086 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
UBE3AQ05086 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
UBE3AQ05086 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
UBE3AQ05086 LINC01613-201ENST00000561476 2780 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
UBE3AQ05086 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
UBE3AQ05086 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.31□□□□□ -1.24
UBE3AQ05086 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.31□□□□□ -1.24
UBE3AQ05086 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.31□□□□□ -1.24
UBE3AQ05086 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
UBE3AQ05086 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
UBE3AQ05086 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
UBE3AQ05086 RNA5SP474-201ENST00000391234 90 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.31□□□□□ -1.24
UBE3AQ05086 PRELID1P1-201ENST00000403549 660 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
UBE3AQ05086 AL590635.1-201ENST00000406314 586 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
UBE3AQ05086 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.31□□□□□ -1.24
UBE3AQ05086 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC7.31□□□□□ -1.24
UBE3AQ05086 GAPDHP57-201ENST00000424400 585 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 TET1P1-201ENST00000426627 2301 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.31□□□□□ -1.24
UBE3AQ05086 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.31□□□□□ -1.24
UBE3AQ05086 COL11A2P1-205ENST00000441798 676 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.31□□□□□ -1.24
UBE3AQ05086 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.31□□□□□ -1.24
UBE3AQ05086 AL583856.1-201ENST00000454078 1101 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 AC131233.1-201ENST00000479200 955 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
UBE3AQ05086 MAST4-IT1-201ENST00000514241 658 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
UBE3AQ05086 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC7.31□□□□□ -1.24
UBE3AQ05086 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
UBE3AQ05086 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC7.31□□□□□ -1.24
UBE3AQ05086 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 AC006328.2-201ENST00000623198 397 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 AC012005.2-201ENST00000624333 397 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 AC061999.1-201ENST00000624454 177 ntBASIC7.31□□□□□ -1.24
UBE3AQ05086 AC011008.2-201ENST00000624866 3352 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms