Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL122023.1-201ENST00000622847 530 ntBASIC7.73□□□□□ -1.17
CCNA1P78396 CDY7P-201ENST00000429883 1604 ntBASIC7.73□□□□□ -1.17
CCNA1P78396 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.73□□□□□ -1.17
CCNA1P78396 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.73□□□□□ -1.17
CCNA1P78396 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.73□□□□□ -1.17
CCNA1P78396 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCNA1P78396 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CCNA1P78396 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCNA1P78396 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCNA1P78396 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CCNA1P78396 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CCNA1P78396 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCNA1P78396 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCNA1P78396 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CCNA1P78396 MAPK10-377ENST00000642006 2752 ntBASIC7.72□□□□□ -1.17
CCNA1P78396 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCNA1P78396 AC020658.2-201ENST00000559030 4020 ntBASIC7.72□□□□□ -1.17
CCNA1P78396 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
CCNA1P78396 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCNA1P78396 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CCNA1P78396 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.72□□□□□ -1.17
CCNA1P78396 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
CCNA1P78396 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CCNA1P78396 SNORA38B-201ENST00000363524 131 ntBASIC7.72□□□□□ -1.17
CCNA1P78396 RNA5SP279-201ENST00000365513 117 ntBASIC7.72□□□□□ -1.17
CCNA1P78396 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.72□□□□□ -1.17
CCNA1P78396 YWHAZP4-201ENST00000392459 708 ntBASIC7.72□□□□□ -1.17
CCNA1P78396 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CCNA1P78396 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.72□□□□□ -1.17
CCNA1P78396 AL773545.3-201ENST00000414297 706 ntBASIC7.72□□□□□ -1.17
CCNA1P78396 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.72□□□□□ -1.17
CCNA1P78396 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.72□□□□□ -1.17
CCNA1P78396 RN7SL39P-201ENST00000462264 297 ntBASIC7.72□□□□□ -1.17
CCNA1P78396 AC135721.2-201ENST00000464237 300 ntBASIC7.72□□□□□ -1.17
CCNA1P78396 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.72□□□□□ -1.17
CCNA1P78396 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.72□□□□□ -1.17
CCNA1P78396 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.72□□□□□ -1.17
CCNA1P78396 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.72□□□□□ -1.17
CCNA1P78396 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.72□□□□□ -1.17
CCNA1P78396 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.72□□□□□ -1.17
CCNA1P78396 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.72□□□□□ -1.17
CCNA1P78396 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.72□□□□□ -1.17
CCNA1P78396 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.72□□□□□ -1.17
CCNA1P78396 AL109924.4-201ENST00000623089 670 ntBASIC7.72□□□□□ -1.17
CCNA1P78396 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.72□□□□□ -1.17
CCNA1P78396 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.72□□□□□ -1.17
CCNA1P78396 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCNA1P78396 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CCNA1P78396 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CCNA1P78396 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CCNA1P78396 AC009166.2-201ENST00000624410 2833 ntBASIC7.72□□□□□ -1.17
CCNA1P78396 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCNA1P78396 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.72□□□□□ -1.17
CCNA1P78396 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CCNA1P78396 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCNA1P78396 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CCNA1P78396 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCNA1P78396 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCNA1P78396 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
CCNA1P78396 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.71□□□□□ -1.17
CCNA1P78396 AC008555.1-201ENST00000561778 2757 ntBASIC7.71□□□□□ -1.17
CCNA1P78396 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CCNA1P78396 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CCNA1P78396 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CCNA1P78396 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.71□□□□□ -1.17
CCNA1P78396 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.71□□□□□ -1.17
CCNA1P78396 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.71□□□□□ -1.17
CCNA1P78396 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
CCNA1P78396 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CCNA1P78396 CASC19-205ENST00000641013 1411 ntBASIC7.71□□□□□ -1.17
CCNA1P78396 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CCNA1P78396 AL023806.3-201ENST00000638502 2704 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 OR2AH1P-202ENST00000641232 2744 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCNA1P78396 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCNA1P78396 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CCNA1P78396 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CCNA1P78396 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CCNA1P78396 AC092642.1-201ENST00000392417 425 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 RNA5SP431-201ENST00000410312 120 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 VN1R20P-201ENST00000425215 966 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.71□□□□□ -1.18
CCNA1P78396 RN7SL870P-201ENST00000460111 296 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 RN7SL552P-201ENST00000462094 276 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.71□□□□□ -1.18
CCNA1P78396 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.71□□□□□ -1.18
CCNA1P78396 OR52H2P-201ENST00000514607 902 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 HSD3BP3-201ENST00000514706 994 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.71□□□□□ -1.18
CCNA1P78396 RPL41P2-201ENST00000544920 409 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.71□□□□□ -1.18
CCNA1P78396 RPL3P13-201ENST00000550415 216 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.71□□□□□ -1.18
CCNA1P78396 AC002310.3-201ENST00000569728 723 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 AL078601.3-201ENST00000573303 535 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.71□□□□□ -1.18
CCNA1P78396 AC011921.2-201ENST00000589465 152 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 AC093635.1-201ENST00000609028 555 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCNA1P78396 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms