Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC007012.2-201ENST00000623206 1676 ntBASIC6.58□□□□□ -1.36
CDH13P55290 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDH13P55290 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CDH13P55290 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.58□□□□□ -1.36
CDH13P55290 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.58□□□□□ -1.36
CDH13P55290 AL359694.2-201ENST00000567753 1615 ntBASIC6.58□□□□□ -1.36
CDH13P55290 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH13P55290 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 AC025809.2-201ENST00000625085 1802 ntBASIC6.57□□□□□ -1.36
CDH13P55290 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
CDH13P55290 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH13P55290 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CDH13P55290 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH13P55290 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CDH13P55290 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 MIR1231-201ENST00000408101 92 ntBASIC6.57□□□□□ -1.36
CDH13P55290 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH13P55290 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH13P55290 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH13P55290 SNRPEP5-201ENST00000425442 278 ntBASIC6.57□□□□□ -1.36
CDH13P55290 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH13P55290 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH13P55290 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH13P55290 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH13P55290 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.57□□□□□ -1.36
CDH13P55290 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH13P55290 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH13P55290 AL139156.3-201ENST00000454802 394 ntBASIC6.57□□□□□ -1.36
CDH13P55290 AL096803.1-201ENST00000456921 1021 ntBASIC6.57□□□□□ -1.36
CDH13P55290 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH13P55290 CBX5P1-201ENST00000468470 561 ntBASIC6.57□□□□□ -1.36
CDH13P55290 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH13P55290 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH13P55290 TECRP2-201ENST00000503270 928 ntBASIC6.57□□□□□ -1.36
CDH13P55290 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 AC097460.2-201ENST00000511857 741 ntBASIC6.57□□□□□ -1.36
CDH13P55290 MTCYBP44-201ENST00000514835 823 ntBASIC6.57□□□□□ -1.36
CDH13P55290 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH13P55290 AC107952.1-201ENST00000524200 376 ntBASIC6.57□□□□□ -1.36
CDH13P55290 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH13P55290 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH13P55290 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH13P55290 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH13P55290 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH13P55290 MIR4428-201ENST00000584884 73 ntBASIC6.57□□□□□ -1.36
CDH13P55290 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH13P55290 AC015849.6-201ENST00000605454 474 ntBASIC6.57□□□□□ -1.36
CDH13P55290 AC004839.1-201ENST00000610269 501 ntBASIC6.57□□□□□ -1.36
CDH13P55290 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH13P55290 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.57□□□□□ -1.36
CDH13P55290 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH13P55290 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 AL139384.2-201ENST00000613809 3590 ntBASIC6.57□□□□□ -1.36
CDH13P55290 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH13P55290 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CDH13P55290 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH13P55290 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CDH13P55290 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 TET1P1-201ENST00000426627 2301 ntBASIC6.56□□□□□ -1.36
CDH13P55290 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CDH13P55290 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 AL359263.1-201ENST00000441188 2796 ntBASIC6.56□□□□□ -1.36
CDH13P55290 AL391261.1-201ENST00000555712 1479 ntBASIC6.56□□□□□ -1.36
CDH13P55290 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH13P55290 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CDH13P55290 RNU12-2P-201ENST00000364789 156 ntBASIC6.56□□□□□ -1.36
CDH13P55290 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CDH13P55290 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CDH13P55290 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH13P55290 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CDH13P55290 AL035696.2-201ENST00000407941 709 ntBASIC6.56□□□□□ -1.36
CDH13P55290 RN7SKP137-201ENST00000411074 307 ntBASIC6.56□□□□□ -1.36
CDH13P55290 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH13P55290 RPL12P10-201ENST00000413498 498 ntBASIC6.56□□□□□ -1.36
CDH13P55290 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.56□□□□□ -1.36
CDH13P55290 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH13P55290 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.56□□□□□ -1.36
CDH13P55290 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH13P55290 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms